myRT

myRT report for GCA_002469285.1_ASM246928v1

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Seq: NMNZ01000120.1 Escherichia coli strain MOD1-EC6587 MOD1-EC6587_120_length_9243_cov_34.5917, whole genome shotgun sequence (9243 bp)
Overview 1 RT 1: 5243-8655 bp Neighborhood of RT #1 [5243, 8663] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 5243-5542 bp Feature: domain Description: InsE Location: 5273-5537 bp Feature: domain Description: InsE Location: 5273-5537 bp Feature: gene Location: 5539-6006 bp Feature: domain Description: PHA02517 Location: 5605-5944 bp Feature: domain Description: PHA0251 7 Location: 5605-5944 bp Feature: gene Location: 6598-7839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6871-7603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6871 -7603 bp Feature: domain Description: GIIM Note: maturase Location: 7678-7834 bp Feature: domain Description: GIIM Note: maturase Location: 7678-7834 bp Feature: gene Location: 7891-8121 bp Feature: gene Location: 8232-8663 bp Feature: domain Description: Tra5 Location: 8238-8655 bp Feature: domain Description: Tra5 Location: 8238-8655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: NMNZ01000071.1 Escherichia coli strain MOD1-EC6587 MOD1-EC6587_71_length_22428_cov_29.3611, whole genome shotgun sequence (22428 bp)
Overview 1 RT 1: 2-3147 bp Neighborhood of RT #1 [2, 3147] Inovirus_Gp2 RVT-GII Feature: gene Location: 2-142 bp Feature: gene Location: 593-1156 bp Feature: domain Description: Inovirus_Gp2 Location: 650-1091 bp Feature: domain Description: Inovirus_Gp2 Location: 650-1091 bp Feature: gene Location: 1482-2645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1596-2283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1596-2 2 83 bp Feature: gene Location: 2632-2940 bp Feature: gene Location: 2974-3147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Inovirus_Gp2 (pfam11726)