myRT

myRT report for GCA_002472095.1_ASM247209v1

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Seq: DKRF01000042.1 TPA_asm: Porphyromonadaceae bacterium UBA7289 UBA7289_contig_1734, whole genome shotgun sequence (53978 bp)
Overview 1 RT 1: 549-2233 bp Neighborhood of RT #1 [549, 2247] RVT-GII GIIM IHF Feature: gene Location: 549-1136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555-1125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555-1 1 25 bp Feature: gene Location: 1152-1571 bp Feature: domain Description: GIIM Note: maturase Location: 1179-1410 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 79-1 41 0 bp Feature: gene Location: 1975-2247 bp Feature: domain Description: IHF Location: 1984-2233 bp Feature: domain Description: IHF Location: 1 984-2233 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), IHF (cd13832), RVT-GII

Seq: DKRF01000039.1 TPA_asm: Porphyromonadaceae bacterium UBA7289 UBA7289_contig_2289, whole genome shotgun sequence (115563 bp)
Overview 1 RT 1: 91812-98069 bp Neighborhood of RT #1 [91812, 98086] LRR_5 LRR_5 LRR_5 LRR_5 RVT-Retrons WG_beta_rep WG_beta_rep WYL Feature: gene Location: 91812-93464 bp Feature: domain Description: LRR_5 Location: 91875-92178 bp Feature: domain Description: LRR_5 Location: 91875-92 178 bp Feature: domain Description: LRR_5 Location: 92244-92556 bp Feature: domain Description: LRR_5 Location: 92 2 44-92 556 bp Feature: domain Description: LRR_5 Location: 92655-92796 bp Feature: domain Description: LRR_5 Location: 92 655-92 796 bp Feature: domain Description: LRR_5 Location: 92925-93057 bp Feature: domain Description: LRR_5 Location: 92 92 5-93057 bp Feature: gene Location: 93736-94581 bp Feature: gene Location: 94583-96217 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 94766-95375 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 94766-95375 bp Feature: gene Location: 96528-96968 bp Feature: domain Description: WG_beta_rep Location: 96609-96696 bp Feature: domain Description: WG_beta_rep Location: 96609-96696 bp Feature: domain Description: WG_beta_rep Location: 96795-96840 bp Feature: domain Description: WG_beta_rep Location: 96795-96840 bp Feature: gene Location: 97028-98086 bp Feature: domain Description: WYL Location: 97520-98069 bp Feature: domain Description: WYL Location: 9752 0-98069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LRR_5 (pfam13306), RVT-Retrons, WG_beta_rep (pfam14903), WYL (pfam13280)