myRT

myRT report for GCA_002474895.1_ASM247489v1

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Seq: NOFR01000020.1 Escherichia coli strain MOD1-EC5163 MOD1-EC5163_20_length_93599_cov_76.7875, whole genome shotgun sequence (93599 bp)
Overview 1 RT 1: 48245-52127 bp Neighborhood of RT #1 [48245, 52132] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 48245-48703 bp Feature: domain Description: dut Location: 48251-48698 bp Feature: domain Description: dut Location: 48251 -48698 bp Feature: gene Location: 48810-49406 bp Feature: domain Description: slmA Location: 48816-49392 bp Feature: domain Description: slmA Location: 4881 6-49392 bp Feature: gene Location: 49452-50411 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49587-50136 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49587-501 36 bp Feature: gene Location: 50709-51365 bp Feature: domain Description: pyrE Location: 50727-51360 bp Feature: domain Description: pyrE Location: 50727-51 360 bp Feature: gene Location: 51416-52132 bp Feature: domain Description: rph Location: 51419-52127 bp Feature: domain Description: rph Location: 51 41 9-521 27 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: NOFR01000057.1 Escherichia coli strain MOD1-EC5163 MOD1-EC5163_57_length_18115_cov_91.7522, whole genome shotgun sequence (18115 bp)
Overview 1 RT 1: 11808-15790 bp Neighborhood of RT #1 [11808, 15816] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 11808-12839 bp Feature: domain Description: Asparaginase_2 Location: 11898-12831 bp Feature: domain Description: Asparaginase_2 Location: 11898-12 831 bp Feature: gene Location: 13166-13315 bp Feature: gene Location: 13363-13809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13669-13771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13669-13771 bp Feature: gene Location: 14031-14402 bp Feature: gene Location: 14455-15816 bp Feature: domain Description: DcuC Location: 14458-15790 bp Feature: domain Description: DcuC Location: 14458-15790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)