myRT

myRT report for GCA_002475325.1_ASM247532v1

Download annotations/find similar RTs

Seq: NOHN01000100.1 Escherichia coli strain MOD1-EC5058 MOD1-EC5058_100_length_5526_cov_89.8211, whole genome shotgun sequence (5526 bp)
Overview 1 RT 1: 2817-5522 bp Neighborhood of RT #1 [2817, 5524] PRK10276 RVT-GII InsA Feature: gene Location: 2817-3242 bp Feature: domain Description: PRK10276 Location: 2820-3228 bp Feature: domain Description: PRK1 0276 Location: 2820-3228 bp Feature: gene Location: 3470-3637 bp Feature: gene Location: 3643-5130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4048-4738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4048-4738 bp Feature: gene Location: 5282-5524 bp Feature: domain Description: InsA Location: 5285-5522 bp Feature: domain Description: InsA Location: 5285-5522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677)

Seq: NOHN01000076.1 Escherichia coli strain MOD1-EC5058 MOD1-EC5058_76_length_12633_cov_60.7383, whole genome shotgun sequence (12633 bp)
Overview 1 RT 1: 7264-11148 bp Neighborhood of RT #1 [7264, 11148] DUF932 RVT-Retrons Feature: gene Location: 7264-7692 bp Feature: gene Location: 7767-8588 bp Feature: domain Description: DUF932 Location: 7881-8553 bp Feature: domain Description: DUF932 Location: 7881-8553 bp Feature: gene Location: 8839-10563 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8977-9601 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8977-9601 bp Feature: gene Location: 10722-10892 bp Feature: gene Location: 11014-11148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-Retrons