myRT

myRT report for GCA_002475545.1_ASM247554v1

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Seq: NOHY01000105.1 Escherichia coli strain MOD1-EC5017 MOD1-EC5017_105_length_2287_cov_40.948, whole genome shotgun sequence (2287 bp)
Overview 1 RT 1: 147-1966 bp Neighborhood of RT #1 [147, 2061] RVT-GII GIIM Feature: gene Location: 147-293 bp Feature: gene Location: 562-2061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1015-1672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 5-1 672 bp Feature: domain Description: GIIM Note: maturase Location: 1756-1966 bp Feature: domain Description: GIIM Note: maturase Location: 1 756-1 966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NOHY01000032.1 Escherichia coli strain MOD1-EC5017 MOD1-EC5017_32_length_53141_cov_42.2364, whole genome shotgun sequence (53141 bp)
Overview 1 RT 1: 13230-18509 bp Neighborhood of RT #1 [13230, 18625] RVT-UG7 PRK09692 Phage_int_SAM_5 INT_C_like_1 Feature: gene Location: 13230-13370 bp Feature: gene Location: 13480-14220 bp Feature: gene Location: 14217-15845 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 14625-15054 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1462 5-15054 bp Feature: gene Location: 15838-17022 bp Feature: domain Description: PRK09692 Location: 15844-16999 bp Feature: domain Description: PRK09692 Location: 15844-16999 bp Feature: gene Location: 17291-18625 bp Feature: domain Description: Phage_int_SAM_5 Location: 17660-17897 bp Feature: domain Description: Phage_int_SAM_5 Location: 17660-17897 bp Feature: domain Description: INT_C_like_1 Location: 17993-18509 bp Feature: domain Description: INT_C_like_1 Location: 17993-18509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), Phage_int_SAM_5 (pfam13102), INT_C_like_1 (cd01184)