myRT

myRT report for GCA_002476305.1_ASM247630v1

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Seq: NWQD01000020.1 Escherichia coli strain MOD1-EC2763 MOD1-EC2763_20_length_92050_cov_89.5431, whole genome shotgun sequence (92050 bp)
Overview 1 RT 1: 82441-86048 bp Neighborhood of RT #1 [82441, 86048] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 82441-82569 bp Feature: gene Location: 82419-82898 bp Feature: domain Description: PHA02517 Location: 82479-82833 bp Feature: domain Description: PHA0251 7 Location: 82479-82833 bp Feature: gene Location: 83490-85013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83763-84495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83763-84495 bp Feature: domain Description: GIIM Note: maturase Location: 84570-84768 bp Feature: domain Description: GIIM Note: maturase Location: 84570-84768 bp Feature: gene Location: 85109-85582 bp Feature: domain Description: PHA02517 Location: 85115-85571 bp Feature: domain Description: PHA0251 7 Location: 851 1 5-85571 bp Feature: gene Location: 85665-86048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NWQD01000084.1 Escherichia coli strain MOD1-EC2763 MOD1-EC2763_84_length_3463_cov_76.645, whole genome shotgun sequence (3463 bp)
Overview 1 RT 1: 195-3157 bp Neighborhood of RT #1 [195, 3157] RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 195-1973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 456-1251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 456-12 51 bp Feature: domain Description: Intron_maturas2 Location: 1377-1602 bp Feature: domain Description: Intron_maturas2 Location: 1377-1602 bp Feature: domain Description: HNHc Note: nucleases Location: 1797-1947 bp Feature: domain Description: HNHc Note: nucleases Location: 1797-1947 bp Feature: gene Location: 2465-2866 bp Feature: domain Description: DUF932 Location: 2576-2858 bp Feature: domain Description: DUF932 Location: 2 576-2 858 bp Feature: gene Location: 2969-3157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF932 (pfam06067)