myRT

myRT report for GCA_002477055.1_ASM247705v1

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Seq: DLNT01000026.1 TPA_asm: Clostridium sp. UBA7503 UBA7503_contig_1858, whole genome shotgun sequence (60135 bp)
Overview 1 RT 1: 36772-39465 bp Neighborhood of RT #1 [36772, 39470] Flavodoxin_5 Fer4 Fer4 RVT-GII COG3963 OmpR Feature: gene Location: 36772-37284 bp Feature: domain Description: Flavodoxin_5 Location: 36787-37033 bp Feature: domain Description: Flavodoxin_5 Location: 36787-37033 bp Feature: gene Location: 37298-37528 bp Feature: domain Description: Fer4 Location: 37334-37388 bp Feature: domain Description: Fer4 Location: 37334-37388 bp Feature: domain Description: Fer4 Location: 37412-37469 bp Feature: domain Description: Fer4 Location: 3741 2-37469 bp Feature: gene Location: 37560-37742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37578-37722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37578-37722 bp Feature: gene Location: 38222-38821 bp Feature: domain Description: COG3963 Location: 38249-38783 bp Feature: domain Description: COG3963 Location: 38249-38783 bp Feature: gene Location: 38793-39470 bp Feature: domain Description: OmpR Location: 38805-39465 bp Feature: domain Description: OmpR Location: 38805-39465 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Flavodoxin_5 (pfam12724), Fer4 (pfam00037), RVT-GII, COG3963 (Phospholipid N-methyltransferase ), OmpR (COG0745)

Seq: DLNT01000014.1 TPA_asm: Clostridium sp. UBA7503 UBA7503_contig_1883, whole genome shotgun sequence (3630 bp)
Overview 1 RT 1: 259-3486 bp Neighborhood of RT #1 [259, 3486] TNT RVT-GII GIIM RVT-GII Feature: gene Location: 259-507 bp Feature: domain Description: TNT Location: 265-499 bp Feature: domain Description: TNT Location: 2 65-499 bp Feature: gene Location: 600-782 bp Feature: gene Location: 1590-2117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1599-1881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1599-1881 bp Feature: domain Description: GIIM Note: maturase Location: 1932-2112 bp Feature: domain Description: GIIM Note: maturase Location: 1932 -2 112 bp Feature: gene Location: 2127-2795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2478-2793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 478-2 793 bp Feature: gene Location: 3316-3486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TNT (pfam14021), RVT-GII, GIIM (pfam08388)

Seq: DLNT01000018.1 TPA_asm: Clostridium sp. UBA7503 UBA7503_contig_454, whole genome shotgun sequence (109740 bp)
Overview 1 RT 1: 79801-82824 bp Neighborhood of RT #1 [79801, 82844] RVT-GII RVT-GII GIIM XhlA Feature: gene Location: 79801-80046 bp Feature: gene Location: 80047-80193 bp Feature: gene Location: 80677-81540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81028-81535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81028-8153 5 bp Feature: gene Location: 81540-82031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81549-81645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81549-81645 bp Feature: domain Description: GIIM Note: maturase Location: 81699-81921 bp Feature: domain Description: GIIM Note: maturase Location: 81699-81921 bp Feature: gene Location: 82313-82471 bp Feature: gene Location: 82611-82844 bp Feature: domain Description: XhlA Location: 82629-82824 bp Feature: domain Description: XhlA Location: 82629-82824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), XhlA (pfam10779)