myRT

myRT report for GCA_002477275.1_ASM247727v1

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Seq: DLOU01000033.1 TPA_asm: Bacillales bacterium UBA7476 UBA7476_contig_1831, whole genome shotgun sequence (43158 bp)
Overview 1 RT 1: 12677-17859 bp Neighborhood of RT #1 [12677, 17864] MutS_I Avd_like RVT-DGRs T_den_put_tspse ligA Feature: gene Location: 12677-13111 bp Feature: domain Description: MutS_I Location: 12704-12896 bp Feature: domain Description: MutS_I Location: 1 2704-1 2896 bp Feature: gene Location: 13104-13487 bp Feature: domain Description: Avd_like Location: 13173-13470 bp Feature: domain Description: Avd_like Location: 1 31 73-1 3470 bp Feature: gene Location: 13471-14619 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13684-14407 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 3684-1 4407 bp Feature: gene Location: 14792-15811 bp Feature: domain Description: T_den_put_tspse Location: 14957-15806 bp Feature: domain Description: T_den_put_tspse Location: 1 4957-1 5806 bp Feature: gene Location: 15876-17864 bp Feature: domain Description: ligA Location: 15885-17859 bp Feature: domain Description: ligA Location: 1 5885-1 7859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MutS_I (pfam01624), Avd_like (cd16376), RVT-DGRs, T_den_put_tspse (TIGR01784), ligA (PRK14351)

Seq: DLOU01000063.1 TPA_asm: Bacillales bacterium UBA7476 UBA7476_contig_348, whole genome shotgun sequence (66062 bp)
Overview 1 RT 1: 37677-41814 bp Neighborhood of RT #1 [37677, 41834] ComEC RVT-Retrons HTH_XRE Feature: gene Location: 37677-38516 bp Feature: domain Description: ComEC Location: 37716-38511 bp Feature: domain Description: ComEC Location: 37716-38511 bp Feature: gene Location: 38587-39252 bp Feature: gene Location: 39954-40892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40077-40677 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40077-40677 bp Feature: gene Location: 40970-41179 bp Feature: gene Location: 41595-41834 bp Feature: domain Description: HTH_XRE Location: 41643-41814 bp Feature: domain Description: HTH_XRE Location: 41643-41814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ComEC (COG2333), RVT-Retrons, HTH_XRE (smart00530)

Seq: DLOU01000028.1 TPA_asm: Bacillales bacterium UBA7476 UBA7476_contig_7164, whole genome shotgun sequence (7683 bp)
Overview 1 RT 1: 5396-7680 bp Neighborhood of RT #1 [5396, 7680] MutS_I Avd_like RVT-DGRs Feature: gene Location: 5396-5818 bp Feature: domain Description: MutS_I Location: 5420-5636 bp Feature: domain Description: MutS_I Location: 5420-563 6 bp Feature: gene Location: 5808-6164 bp Feature: domain Description: Avd_like Location: 5835-6138 bp Feature: domain Description: Avd_like Location: 583 5-613 8 bp Feature: gene Location: 6384-7067 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6390-6954 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 63 90-6954 bp Feature: gene Location: 7153-7284 bp Feature: gene Location: 7432-7680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MutS_I (pfam01624), Avd_like (cd16376), RVT-DGRs

Seq: DLOU01000011.1 TPA_asm: Bacillales bacterium UBA7476 UBA7476_contig_904, whole genome shotgun sequence (50765 bp)
Overview 1 RT 1: 5609-10082 bp Neighborhood of RT #1 [5609, 10082] tRNA_CCA_actino ASCH_ASC-1_like RVT-DGRs Feature: gene Location: 5609-6172 bp Feature: domain Description: tRNA_CCA_actino Location: 5621-6107 bp Feature: domain Description: tRNA_CCA_actino Location: 5621-6107 bp Feature: gene Location: 6181-6582 bp Feature: domain Description: ASCH_ASC-1_like Location: 6193-6523 bp Feature: domain Description: ASCH_ASC-1_like Location: 6193-6523 bp Feature: gene Location: 6632-7672 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6965-7373 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6965-7373 bp Feature: gene Location: 8057-8596 bp Feature: gene Location: 8778-10082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tRNA_CCA_actino (TIGR02692), ASCH_ASC-1_like (cd06554), RVT-DGRs