myRT

myRT report for GCA_002477915.1_ASM247791v1

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Seq: DLKZ01000037.1 TPA_asm: Lachnospiraceae bacterium UBA7575 UBA7575_contig_1965, whole genome shotgun sequence (33466 bp)
Overview 1 RT 1: 5978-11947 bp Neighborhood of RT #1 [5978, 11961] ACD_LpsHSP_like SLC6sbd_Tyt1-Like RVT-GII GIIM amt GlnK Feature: gene Location: 5978-6418 bp Feature: domain Description: ACD_LpsHSP_like Location: 6089-6368 bp Feature: domain Description: ACD_LpsHSP_like Location: 6089-6368 bp Feature: gene Location: 6744-8117 bp Feature: domain Description: SLC6sbd_Tyt1-Like Location: 6774-8088 bp Feature: domain Description: SLC6sbd_Tyt1 -Like Location: 6774-8088 bp Feature: gene Location: 8222-9634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8573-9194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8573-91 94 bp Feature: domain Description: GIIM Note: maturase Location: 9248-9473 bp Feature: domain Description: GIIM Note: maturase Location: 9248-9473 bp Feature: gene Location: 9631-9813 bp Feature: gene Location: 10174-11961 bp Feature: domain Description: amt Location: 10228-11443 bp Feature: domain Description: amt Location: 1 0228-1 1 443 bp Feature: domain Description: GlnK Location: 11620-11947 bp Feature: domain Description: GlnK Location: 1 1 620-1 1 947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ACD_LpsHSP_like (cd06471), SLC6sbd_Tyt1-Like (cd10336), RVT-GII, GIIM (pfam08388), amt (TIGR00836), GlnK (COG0347)

Seq: DLKZ01000117.1 TPA_asm: Lachnospiraceae bacterium UBA7575 UBA7575_contig_5104, whole genome shotgun sequence (13601 bp)
Overview 1 RT 1: 2578-7550 bp Neighborhood of RT #1 [2578, 7555] YhcC SfcA RVT-UG26 infC Feature: gene Location: 2578-3537 bp Feature: domain Description: YhcC Location: 2602-3532 bp Feature: domain Description: YhcC Location: 2 602 -3532 bp Feature: gene Location: 3585-4739 bp Feature: domain Description: SfcA Location: 3594-4728 bp Feature: domain Description: SfcA Location: 3594-472 8 bp Feature: gene Location: 4845-6143 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 5094-5709 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 5094-5709 bp Feature: gene Location: 6301-6684 bp Feature: gene Location: 6995-7555 bp Feature: domain Description: infC Location: 7052-7550 bp Feature: domain Description: infC Location: 7052 -7550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhcC (COG1242), SfcA (COG0281), RVT-UG26, infC (TIGR00168)