myRT

myRT report for GCA_002478505.1_ASM247850v1

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Seq: DLOP01000137.1 TPA_asm: Lachnospiraceae bacterium UBA7481 UBA7481_contig_1007, whole genome shotgun sequence (28665 bp)
Overview 1 RT 1: 3-3026 bp Neighborhood of RT #1 [3, 3026] HTH_19 RVT-UG2 Feature: gene Location: 3-332 bp Feature: domain Description: HTH_19 Location: 87-261 bp Feature: domain Description: HTH_1 9 Location: 87-261 bp Feature: gene Location: 413-1816 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 680-1496 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 680-1 496 bp Feature: gene Location: 2122-2601 bp Feature: gene Location: 2664-3026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_19 (pfam12844), RVT-UG2

Seq: DLOP01000030.1 TPA_asm: Lachnospiraceae bacterium UBA7481 UBA7481_contig_1044, whole genome shotgun sequence (48120 bp)
Overview 1 RT 1: 15787-20508 bp Neighborhood of RT #1 [15787, 20558] Glucos_trans_II Beta4Glucosyltransferase RVT-UG26 RelB_DinJ Feature: gene Location: 15787-17346 bp Feature: domain Description: Glucos_trans_II Location: 15853-16780 bp Feature: domain Description: Glucos_trans_II Location: 15853-16780 bp Feature: gene Location: 17400-18410 bp Feature: domain Description: Beta4Glucosyltransferase Location: 17409-17916 bp Feature: domain Description: Beta4Glucosyltransferase Location: 17409-17916 bp Feature: gene Location: 18437-19651 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 18644-19259 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 18644-192 59 bp Feature: gene Location: 19950-20249 bp Feature: gene Location: 20286-20558 bp Feature: domain Description: RelB_DinJ Location: 20289-20508 bp Feature: domain Description: RelB_DinJ Location: 2 02 89-2 0508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucos_trans_II (pfam14264), Beta4Glucosyltransferase (cd02511), RVT-UG26, RelB_DinJ (TIGR02384)

Seq: DLOP01000145.1 TPA_asm: Lachnospiraceae bacterium UBA7481 UBA7481_contig_868, whole genome shotgun sequence (47929 bp)
Overview 1 RT 1: 6999-11278 bp Neighborhood of RT #1 [6999, 11278] Dut RVT-GII GIIM GerA GerA Feature: gene Location: 6999-7433 bp Feature: domain Description: Dut Location: 7020-7428 bp Feature: domain Description: Dut Location: 7020-7428 bp Feature: gene Location: 7749-7892 bp Feature: gene Location: 7926-9344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8277-8895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8277-8895 bp Feature: domain Description: GIIM Note: maturase Location: 8949-9180 bp Feature: domain Description: GIIM Note: maturase Location: 8949-9180 bp Feature: gene Location: 9559-10947 bp Feature: domain Description: GerA Location: 9622-10297 bp Feature: domain Description: GerA Location: 9622-10297 bp Feature: domain Description: GerA Location: 10417-10924 bp Feature: domain Description: GerA Location: 10417-10924 bp Feature: gene Location: 11099-11278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dut (COG0756), RVT-GII, GIIM (pfam08388), GerA (pfam03323)