myRT

myRT report for GCA_002483365.1_ASM248336v1

Download annotations/find similar RTs

Seq: DLHT01000018.1 TPA_asm: Cellvibrio sp. UBA7661 UBA7661_contig_250, whole genome shotgun sequence (511178 bp)
Overview 1 RT 1: 241885-246531 bp 2 RT 2: 427702-435520 bp Neighborhood of RT #1 [241885, 246551] PRK09692 RVT_N RVT-GII YkfC HNHc PRK10832 Neighborhood of RT #2 [427702, 435520] pepcterm_ATPase RVT_N RVT-GII YkfC HNHc PRK05367 Feature: gene Location: 241885-242658 bp Feature: domain Description: PRK09692 Location: 241900-242650 bp Feature: domain Description: PRK09692 Location: 241 900-242650 bp Feature: gene Location: 242872-243042 bp Feature: gene Location: 243218-244954 bp Feature: RT Description: RVT_N Location: 243275-243518 bp Feature: RT Description: RVT_N Location: 243275-24351 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243566-244217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243566-24421 7 bp Feature: domain Description: YkfC Location: 244439-244589 bp Feature: domain Description: YkfC Location: 244439-244589 bp Feature: domain Description: HNHc Note: nucleases Location: 244742-244907 bp Feature: domain Description: HNHc Note: nucleases Location: 244742-244907 bp Feature: gene Location: 245050-245289 bp Feature: gene Location: 245997-246551 bp Feature: domain Description: PRK10832 Location: 246000-246531 bp Feature: domain Description: PRK1 0832 Location: 246000-246531 bp Feature: gene Location: 427702-429396 bp Feature: domain Description: pepcterm_ATPase Location: 427705-428503 bp Feature: domain Description: pepcterm_ATPase Location: 427705-428503 bp Feature: gene Location: 430123-430266 bp Feature: gene Location: 430458-432194 bp Feature: RT Description: RVT_N Location: 430515-430758 bp Feature: RT Description: RVT_N Location: 43051 5-430758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430806-431457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430806-431 457 bp Feature: domain Description: YkfC Location: 431679-431778 bp Feature: domain Description: YkfC Location: 431 679-431 778 bp Feature: domain Description: HNHc Note: nucleases Location: 431982-432147 bp Feature: domain Description: HNHc Note: nucleases Location: 431 982-4321 47 bp Feature: gene Location: 432394-435303 bp Feature: domain Description: PRK05367 Location: 432436-435295 bp Feature: domain Description: PRK05367 Location: 432436-435295 bp Feature: gene Location: 435389-435520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK10832 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase), pepcterm_ATPase (TIGR03015), PRK05367 (aminomethyl-transferring glycine dehydrogenase)

Seq: DLHT01000010.1 TPA_asm: Cellvibrio sp. UBA7661 UBA7661_contig_278, whole genome shotgun sequence (98092 bp)
Overview 1 RT 1: 95016-97974 bp Neighborhood of RT #1 [95016, 97974] DUF2778 DUF2195 RVT-GII GIIM Feature: gene Location: 95016-95537 bp Feature: domain Description: DUF2778 Location: 95073-95466 bp Feature: domain Description: DUF2 778 Location: 95073-95466 bp Feature: gene Location: 95518-95898 bp Feature: domain Description: DUF2195 Location: 95572-95893 bp Feature: domain Description: DUF2 195 Location: 95572 -95893 bp Feature: gene Location: 96260-97591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96551-97214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96551-972 14 bp Feature: domain Description: GIIM Note: maturase Location: 97283-97499 bp Feature: domain Description: GIIM Note: maturase Location: 972 83-97499 bp Feature: gene Location: 97612-97974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2778 (pfam10908), DUF2195 (pfam09961), RVT-GII, GIIM (pfam08388)