myRT

myRT report for GCA_002484415.1_ASM248441v1

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Seq: NNSZ01000048.1 Escherichia coli strain MOD1-EC6679 MOD1-EC6679_48_length_19353_cov_54.0789, whole genome shotgun sequence (19353 bp)
Overview 1 RT 1: 14575-17746 bp Neighborhood of RT #1 [14575, 17748] PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 14575-15258 bp Feature: domain Description: PRK10276 Location: 14878-15241 bp Feature: domain Description: PRK1 0276 Location: 1 4878-1 5241 bp Feature: gene Location: 15412-15777 bp Feature: gene Location: 15889-16899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15895-16507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5895-1 6507 bp Feature: gene Location: 17051-17326 bp Feature: domain Description: InsA Location: 17054-17318 bp Feature: domain Description: InsA Location: 1 7054-1 731 8 bp Feature: gene Location: 17245-17748 bp Feature: domain Description: DDE_Tnp_IS1 Location: 17356-17746 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1 7356-1 7746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: NNSZ01000056.1 Escherichia coli strain MOD1-EC6679 MOD1-EC6679_56_length_8904_cov_61.328, whole genome shotgun sequence (8904 bp)
Overview 1 RT 1: 1039-8903 bp Neighborhood of RT #1 [1039, 8902] PAAR_2 RhsA RHS_repeat RhsA RhsA RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 1039-5259 bp Feature: domain Description: PAAR_2 Location: 1045-1126 bp Feature: domain Description: PAAR_2 Location: 1045-112 6 bp Feature: domain Description: RhsA Location: 1624-2071 bp Feature: domain Description: RhsA Location: 162 4-2 071 bp Feature: domain Description: RHS_repeat Location: 2134-2224 bp Feature: domain Description: RHS_repeat Location: 2 134-2 2 2 4 bp Feature: domain Description: RhsA Location: 2293-2629 bp Feature: domain Description: RhsA Location: 2 2 93-2 62 9 bp Feature: domain Description: RhsA Location: 2656-4825 bp Feature: domain Description: RhsA Location: 2 656-482 5 bp Feature: gene Location: 6273-6647 bp Feature: gene Location: 6996-8495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7449-8106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7449-8106 bp Feature: domain Description: GIIM Note: maturase Location: 8190-8400 bp Feature: domain Description: GIIM Note: maturase Location: 8190-8400 bp Feature: gene Location: 8702-8902 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 8723-8903 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 872 3-8903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAAR_2 (cd14738), RhsA (COG3209), RHS_repeat (pfam05593), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)