myRT

myRT report for GCA_002484595.1_ASM248459v1

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Seq: NNTJ01000128.1 Escherichia coli strain MOD1-EC6668 MOD1-EC6668_128_length_2272_cov_1117.89, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NNTJ01000037.1 Escherichia coli strain MOD1-EC6668 MOD1-EC6668_37_length_44019_cov_64.064, whole genome shotgun sequence (44019 bp)
Overview 1 RT 1: 9817-13699 bp Neighborhood of RT #1 [9817, 13704] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 9817-10275 bp Feature: domain Description: dut Location: 9823-10270 bp Feature: domain Description: dut Location: 982 3-102 70 bp Feature: gene Location: 10382-10978 bp Feature: domain Description: slmA Location: 10388-10964 bp Feature: domain Description: slmA Location: 10388-10964 bp Feature: gene Location: 11024-11983 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11159-11708 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11159-11708 bp Feature: gene Location: 12281-12937 bp Feature: domain Description: pyrE Location: 12299-12932 bp Feature: domain Description: pyrE Location: 12 2 99-12 932 bp Feature: gene Location: 12988-13704 bp Feature: domain Description: rph Location: 12991-13699 bp Feature: domain Description: rph Location: 12 991-13699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173), dut (TIGR00576)