myRT

myRT report for GCA_002484835.1_ASM248483v1

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Seq: NNTV01000015.1 Escherichia coli strain MOD1-EC6655 MOD1-EC6655_15_length_109365_cov_52.4707, whole genome shotgun sequence (109365 bp)
Overview 1 RT 1: 21911-25865 bp Neighborhood of RT #1 [21911, 25865] HTH_XRE RVT-Retrons PRK13889 Feature: gene Location: 21911-22126 bp Feature: gene Location: 22217-22498 bp Feature: domain Description: HTH_XRE Location: 22232-22397 bp Feature: domain Description: HTH_XRE Location: 22232-22397 bp Feature: gene Location: 22491-23591 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22632-23184 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22632-231 84 bp Feature: gene Location: 23668-24855 bp Feature: domain Description: PRK13889 Location: 23743-23935 bp Feature: domain Description: PRK1 3889 Location: 23743-23935 bp Feature: gene Location: 24894-25865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional)

Seq: NNTV01000087.1 Escherichia coli strain MOD1-EC6655 MOD1-EC6655_87_length_1820_cov_306.967, whole genome shotgun sequence (1820 bp)
Overview 1 RT 1: 2-1666 bp Neighborhood of RT #1 [2, 1818] RVT-GII Feature: gene Location: 2-367 bp Feature: gene Location: 661-1818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 934-1666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 934-1666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII