myRT

myRT report for GCA_002484855.1_ASM248485v1

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Seq: NNTW01000010.1 Escherichia coli strain MOD1-EC6654 MOD1-EC6654_10_length_177911_cov_53.7256, whole genome shotgun sequence (177911 bp)
Overview 1 RT 1: 49333-53215 bp Neighborhood of RT #1 [49333, 53220] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49333-49791 bp Feature: domain Description: dut Location: 49339-49786 bp Feature: domain Description: dut Location: 49339-49786 bp Feature: gene Location: 49898-50494 bp Feature: domain Description: slmA Location: 49904-50480 bp Feature: domain Description: slmA Location: 49904-50480 bp Feature: gene Location: 50540-51499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50675-51224 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50675-51 224 bp Feature: gene Location: 51797-52453 bp Feature: domain Description: pyrE Location: 51815-52448 bp Feature: domain Description: pyrE Location: 51 81 5-52448 bp Feature: gene Location: 52504-53220 bp Feature: domain Description: rph Location: 52507-53215 bp Feature: domain Description: rph Location: 52507-5321 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: NNTW01000040.1 Escherichia coli strain MOD1-EC6654 MOD1-EC6654_40_length_20951_cov_57.7187, whole genome shotgun sequence (20951 bp)
Overview 1 RT 1: 17829-20715 bp Neighborhood of RT #1 [17829, 20715] RVT-GII GIIM Feature: gene Location: 17829-17972 bp Feature: gene Location: 17997-18200 bp Feature: gene Location: 18268-19791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18541-19273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18541-192 73 bp Feature: domain Description: GIIM Note: maturase Location: 19348-19546 bp Feature: domain Description: GIIM Note: maturase Location: 19348-19546 bp Feature: gene Location: 20085-20522 bp Feature: gene Location: 20527-20715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)