myRT

myRT report for GCA_002485225.1_ASM248522v1

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Seq: NNUO01000028.1 Escherichia coli strain MOD1-EC6629 MOD1-EC6629_28_length_53719_cov_29.2171, whole genome shotgun sequence (53719 bp)
Overview 1 RT 1: 9568-15574 bp Neighborhood of RT #1 [9568, 15579] P Q RVT-Retrons DinI Feature: gene Location: 9568-11334 bp Feature: domain Description: P Location: 9595-11329 bp Feature: domain Description: P Location: 9595-1 1 329 bp Feature: gene Location: 11334-12365 bp Feature: domain Description: Q Location: 11337-12360 bp Feature: domain Description: Q Location: 1 1 337-1 2360 bp Feature: gene Location: 12415-14172 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12559-13180 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2559-1 31 80 bp Feature: gene Location: 14818-15153 bp Feature: gene Location: 15346-15579 bp Feature: domain Description: DinI Location: 15388-15574 bp Feature: domain Description: DinI Location: 1 5388-1 5574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, DinI (pfam06183), P (PHA02535)

Seq: NNUO01000055.1 Escherichia coli strain MOD1-EC6629 MOD1-EC6629_55_length_10910_cov_39.6592, whole genome shotgun sequence (10910 bp)
Overview 1 RT 1: 185-1243 bp Neighborhood of RT #1 [185, 1243] RVT_N RVT-GII Feature: gene Location: 185-811 bp Feature: RT Description: RVT_N Location: 233-470 bp Feature: RT Description: RVT_N Location: 2 33-470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 521-770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 1-770 bp Feature: gene Location: 886-1026 bp Feature: gene Location: 1103-1243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII