myRT

myRT report for GCA_002485605.1_ASM248560v1

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Seq: NNVH01000002.1 Escherichia coli strain MOD1-EC6537 MOD1-EC6537_2_length_306371_cov_21.4035, whole genome shotgun sequence (306371 bp)
Overview 1 RT 1: 291509-293933 bp Neighborhood of RT #1 [291509, 294007] PHA02517 InsE RVT-GII RVT-GII group_II_RT_mat IS285 Feature: gene Location: 291509-292222 bp Feature: domain Description: PHA02517 Location: 291527-292211 bp Feature: domain Description: PHA0251 7 Location: 291 527-29221 1 bp Feature: gene Location: 292363-292665 bp Feature: domain Description: InsE Location: 292366-292651 bp Feature: domain Description: InsE Location: 292366-292651 bp Feature: gene Location: 292704-292907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292749-292905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292749-292905 bp Feature: gene Location: 292941-293177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292944-293127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292944-2931 27 bp Feature: gene Location: 293170-293382 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 293173-293371 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2931 73-293371 bp Feature: gene Location: 293525-294007 bp Feature: domain Description: IS285 Location: 293555-293933 bp Feature: domain Description: IS285 Location: 293555-293933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, group_II_RT_mat (TIGR04416), IS285 (COG3328)

Seq: NNVH01000038.1 Escherichia coli strain MOD1-EC6537 MOD1-EC6537_38_length_41617_cov_20.826, whole genome shotgun sequence (41617 bp)
Overview 1 RT 1: 11686-18653 bp Neighborhood of RT #1 [11686, 19543] Q RVT-Retrons RVT-AbiP2 Phage_GPA Feature: gene Location: 11686-12705 bp Feature: domain Description: Q Location: 11689-12700 bp Feature: domain Description: Q Location: 11689-12 700 bp Feature: gene Location: 12748-13455 bp Feature: gene Location: 13452-14642 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13602-14184 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13602 -14184 bp Feature: gene Location: 15193-16737 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 15610-16063 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 15610-16063 bp Feature: gene Location: 16903-17163 bp Feature: gene Location: 17225-19543 bp Feature: domain Description: Phage_GPA Location: 17666-18653 bp Feature: domain Description: Phage_GPA Location: 17666-18653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, RVT-AbiP2, Phage_GPA (pfam05840)