myRT

myRT report for GCA_002485915.1_ASM248591v1

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Seq: NNVX01000046.1 Escherichia coli strain MOD1-EC6455 MOD1-EC6455_46_length_27487_cov_28.6806, whole genome shotgun sequence (27487 bp)
Overview 1 RT 1: 165-6307 bp Neighborhood of RT #1 [165, 6324] PRK09692 RVT-UG7 Psu Feature: gene Location: 165-1304 bp Feature: gene Location: 1907-3091 bp Feature: domain Description: PRK09692 Location: 1913-3068 bp Feature: domain Description: PRK09692 Location: 1 91 3-3068 bp Feature: gene Location: 3084-4712 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3492-3921 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3492-3921 bp Feature: gene Location: 4709-5449 bp Feature: gene Location: 5752-6324 bp Feature: domain Description: Psu Location: 5770-6307 bp Feature: domain Description: Psu Location: 5770-6307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: NNVX01000056.1 Escherichia coli strain MOD1-EC6455 MOD1-EC6455_56_length_14133_cov_16.6582, whole genome shotgun sequence (14133 bp)
Overview 1 RT 1: 5107-8866 bp Neighborhood of RT #1 [5107, 8931] PRK09413 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 5107-5472 bp Feature: domain Description: PRK09413 Location: 5110-5470 bp Feature: domain Description: PRK09413 Location: 5110-5470 bp Feature: gene Location: 5774-6220 bp Feature: domain Description: PHA02517 Location: 5777-6218 bp Feature: domain Description: PHA02 517 Location: 5777-62 18 bp Feature: gene Location: 6337-7860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6610-7342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6610-7342 bp Feature: domain Description: GIIM Note: maturase Location: 7417-7615 bp Feature: domain Description: GIIM Note: maturase Location: 7417-7615 bp Feature: gene Location: 7814-8239 bp Feature: gene Location: 8452-8931 bp Feature: domain Description: PHA02517 Location: 8512-8866 bp Feature: domain Description: PHA02 517 Location: 8512 -8866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)