myRT

myRT report for GCA_002486005.1_ASM248600v1

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Seq: NNWB01000037.1 Escherichia coli strain MOD1-EC6448 MOD1-EC6448_37_length_36998_cov_25.1883, whole genome shotgun sequence (36998 bp)
Overview 1 RT 1: 33866-35991 bp Neighborhood of RT #1 [33866, 36230] RVT-Retrons Feature: gene Location: 33866-34060 bp Feature: gene Location: 34343-35311 bp Feature: gene Location: 35298-36230 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35400-35991 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35400-35991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: NNWB01000043.1 Escherichia coli strain MOD1-EC6448 MOD1-EC6448_43_length_24370_cov_32.5487, whole genome shotgun sequence (24370 bp)
Overview 1 RT 1: 12664-16490 bp Neighborhood of RT #1 [12664, 16490] DDE_Tnp_IS66 DDE_Tnp_IS66_C PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 12664-13182 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12682-13027 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12 682 -1302 7 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 13048-13159 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 13048-13159 bp Feature: gene Location: 13317-13529 bp Feature: domain Description: PHA02517 Location: 13320-13464 bp Feature: domain Description: PHA02 517 Location: 1332 0-13464 bp Feature: gene Location: 14121-15644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14394-15126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14394-1512 6 bp Feature: domain Description: GIIM Note: maturase Location: 15201-15399 bp Feature: domain Description: GIIM Note: maturase Location: 152 01-15399 bp Feature: gene Location: 15761-16207 bp Feature: domain Description: PHA02517 Location: 15764-16205 bp Feature: domain Description: PHA02 517 Location: 15764-162 05 bp Feature: gene Location: 16173-16490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)