myRT

myRT report for GCA_002486495.1_ASM248649v1

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Seq: NOCG01000012.1 Escherichia coli strain MOD1-EC5806 MOD1-EC5806_12_length_149506_cov_40.2036, whole genome shotgun sequence (149506 bp)
Overview 1 RT 1: 49289-53171 bp Neighborhood of RT #1 [49289, 53176] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49289-49747 bp Feature: domain Description: dut Location: 49295-49742 bp Feature: domain Description: dut Location: 49295-49742 bp Feature: gene Location: 49854-50450 bp Feature: domain Description: slmA Location: 49860-50436 bp Feature: domain Description: slmA Location: 49860-50436 bp Feature: gene Location: 50496-51455 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50631-51180 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50631 -51 1 80 bp Feature: gene Location: 51753-52409 bp Feature: domain Description: pyrE Location: 51771-52404 bp Feature: domain Description: pyrE Location: 51 771 -52404 bp Feature: gene Location: 52460-53176 bp Feature: domain Description: rph Location: 52463-53171 bp Feature: domain Description: rph Location: 52463-531 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: NOCG01000013.1 Escherichia coli strain MOD1-EC5806 MOD1-EC5806_13_length_133959_cov_39.8237, whole genome shotgun sequence (133959 bp)
Overview 1 RT 1: 203-2963 bp Neighborhood of RT #1 [203, 2968] RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 203-340 bp Feature: gene Location: 356-490 bp Feature: gene Location: 598-1968 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 826-1432 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 82 6-1432 bp Feature: gene Location: 1946-2497 bp Feature: domain Description: SLATT_5 Location: 1952-2468 bp Feature: domain Description: SLATT_5 Location: 1952 -2 468 bp Feature: gene Location: 2720-2968 bp Feature: domain Description: PRK10597 Location: 2723-2963 bp Feature: domain Description: PRK10597 Location: 2 72 3-2 963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)