myRT

myRT report for GCA_002486855.1_ASM248685v1

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Seq: NNWY01000073.1 Escherichia coli strain MOD1-EC6313 MOD1-EC6313_73_length_3286_cov_58.2552, whole genome shotgun sequence (3286 bp)
Overview 1 RT 1: 187-3144 bp Neighborhood of RT #1 [187, 3167] RVT-GII GIIM PHA02517 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 187-1710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460-1192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460-1 1 92 bp Feature: domain Description: GIIM Note: maturase Location: 1267-1465 bp Feature: domain Description: GIIM Note: maturase Location: 1 267-1 465 bp Feature: gene Location: 2302-2514 bp Feature: domain Description: PHA02517 Location: 2305-2449 bp Feature: domain Description: PHA0251 7 Location: 2305-2449 bp Feature: gene Location: 2736-3167 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2742-3012 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2742-301 2 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3033-3144 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3033-31 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: NNWY01000007.1 Escherichia coli strain MOD1-EC6313 MOD1-EC6313_7_length_158377_cov_38.0368, whole genome shotgun sequence (158377 bp)
Overview 1 RT 1: 95270-101339 bp Neighborhood of RT #1 [95270, 101374] COG3378 RVT-UG7 PRK09692 proA Feature: gene Location: 95270-96025 bp Feature: domain Description: COG3378 Location: 95276-96014 bp Feature: domain Description: COG3378 Location: 952 76-96014 bp Feature: gene Location: 96224-96964 bp Feature: gene Location: 96961-98589 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 97369-97798 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 97369-97798 bp Feature: gene Location: 98582-99766 bp Feature: domain Description: PRK09692 Location: 98588-99743 bp Feature: domain Description: PRK09692 Location: 98588-99743 bp Feature: gene Location: 100121-101374 bp Feature: domain Description: proA Location: 100148-101339 bp Feature: domain Description: proA Location: 100148-101339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3378 (Phage- or plasmid-associated DNA primase ), RVT-UG7, PRK09692 (Integrase; provisional), proA (TIGR00407)