myRT

myRT report for GCA_002487095.1_ASM248709v1

Download annotations/find similar RTs

Seq: NNXP01000032.1 Escherichia coli strain MOD1-EC6272 MOD1-EC6272_32_length_57134_cov_55.2885, whole genome shotgun sequence (57134 bp)
Overview 1 RT 1: 19231-23814 bp Neighborhood of RT #1 [19231, 24077] RVT-GII Inovirus_Gp2 DUF3987 Feature: gene Location: 19231-19404 bp Feature: gene Location: 19438-19746 bp Feature: gene Location: 19733-20896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19847-20534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9847-20534 bp Feature: gene Location: 21222-21785 bp Feature: domain Description: Inovirus_Gp2 Location: 21279-21720 bp Feature: domain Description: Inovirus_Gp2 Location: 21 279-21 720 bp Feature: gene Location: 22644-24077 bp Feature: domain Description: DUF3987 Location: 22737-23814 bp Feature: domain Description: DUF3987 Location: 22737-2381 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Inovirus_Gp2 (pfam11726), DUF3987 (pfam13148)

Seq: NNXP01000063.1 Escherichia coli strain MOD1-EC6272 MOD1-EC6272_63_length_8786_cov_68.8322, whole genome shotgun sequence (8786 bp)
Overview 1 RT 1: 5193-8605 bp Neighborhood of RT #1 [5193, 8613] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 5193-5492 bp Feature: domain Description: InsE Location: 5223-5487 bp Feature: domain Description: InsE Location: 52 2 3-5487 bp Feature: gene Location: 5489-5956 bp Feature: domain Description: PHA02517 Location: 5555-5894 bp Feature: domain Description: PHA02 517 Location: 5555-5894 bp Feature: gene Location: 6548-7789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6821-7553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 682 1-7553 bp Feature: domain Description: GIIM Note: maturase Location: 7628-7784 bp Feature: domain Description: GIIM Note: maturase Location: 762 8-7784 bp Feature: gene Location: 7841-8071 bp Feature: gene Location: 8182-8613 bp Feature: domain Description: Tra5 Location: 8188-8605 bp Feature: domain Description: Tra5 Location: 8188-8605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: NNXP01000070.1 Escherichia coli strain MOD1-EC6272 MOD1-EC6272_70_length_5808_cov_58.7419, whole genome shotgun sequence (5808 bp)
Overview 1 RT 1: 1-3452 bp Neighborhood of RT #1 [1, 3452] YhhI YhhI YhhI group_II_RT_mat RVT-GII Feature: gene Location: 1-894 bp Feature: domain Description: YhhI Location: 7-352 bp Feature: domain Description: YhhI Location: 7-3 52 bp Feature: domain Description: YhhI Location: 409-763 bp Feature: domain Description: YhhI Location: 409-763 bp Feature: domain Description: YhhI Location: 763-895 bp Feature: domain Description: YhhI Location: 763 -895 bp Feature: gene Location: 1258-1509 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1264-1492 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1264-1492 bp Feature: gene Location: 1531-2610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2002-2593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2002-2593 bp Feature: gene Location: 2787-3011 bp Feature: gene Location: 3054-3452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, YhhI (COG5433)