myRT

myRT report for GCA_002490885.1_ASM249088v1

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Seq: DKUW01000032.1 TPA_asm: Porphyromonadaceae bacterium UBA7194 UBA7194_contig_358, whole genome shotgun sequence (192522 bp)
Overview 1 RT 1: 180712-186699 bp Neighborhood of RT #1 [180712, 186884] DUF4133 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4141 Syntaxin-6_N Feature: gene Location: 180712-181035 bp Feature: domain Description: DUF4133 Location: 180730-180994 bp Feature: domain Description: DUF41 33 Location: 1 80730-1 80994 bp Feature: gene Location: 181032-183131 bp Feature: domain Description: Bac_Flav_CT_G Location: 181035-183117 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 81 035-1 831 1 7 bp Feature: gene Location: 183752-185563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184016-184838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8401 6-1 84838 bp Feature: domain Description: Intron_maturas2 Location: 184913-185216 bp Feature: domain Description: Intron_maturas2 Location: 1 8491 3-1 8521 6 bp Feature: domain Description: HNHc Note: nucleases Location: 185381-185534 bp Feature: domain Description: HNHc Note: nucleases Location: 1 85381 -1 85534 bp Feature: gene Location: 185642-186097 bp Feature: domain Description: Bac_Flav_CT_G Location: 185660-186083 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 85660-1 86083 bp Feature: gene Location: 186246-186884 bp Feature: domain Description: DUF4141 Location: 186273-186423 bp Feature: domain Description: DUF41 41 Location: 1 86273-1 86423 bp Feature: domain Description: Syntaxin-6_N Location: 186507-186699 bp Feature: domain Description: Syntaxin-6_N Location: 1 86507-1 86699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4141 (pfam13605), Syntaxin-6_N (pfam09177)

Seq: DKUW01000048.1 TPA_asm: Porphyromonadaceae bacterium UBA7194 UBA7194_contig_477, whole genome shotgun sequence (61238 bp)
Overview 1 RT 1: 10170-13559 bp Neighborhood of RT #1 [10170, 13576] PRK11071 RVT-Retrons WYL Feature: gene Location: 10170-10457 bp Feature: gene Location: 10651-11274 bp Feature: domain Description: PRK11071 Location: 10660-11032 bp Feature: domain Description: PRK11071 Location: 10660-11032 bp Feature: gene Location: 11271-12350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11460-12051 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11460-12 051 bp Feature: gene Location: 12339-12593 bp Feature: gene Location: 12662-13576 bp Feature: domain Description: WYL Location: 13028-13559 bp Feature: domain Description: WYL Location: 1302 8-13559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11071 (esterase YqiA; Provisional), RVT-Retrons, WYL (pfam13280)

Seq: DKUW01000005.1 TPA_asm: Porphyromonadaceae bacterium UBA7194 UBA7194_contig_687, whole genome shotgun sequence (35316 bp)
Overview 1 RT 1: 5184-9164 bp Neighborhood of RT #1 [5184, 9301] RVT-Retrons HAD_Neu5Ac-Pase_like HAD_Neu5Ac-Pase_like Feature: gene Location: 5184-5336 bp Feature: gene Location: 5429-5614 bp Feature: gene Location: 5672-7288 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5867-6476 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5867-6476 bp Feature: gene Location: 7290-8123 bp Feature: gene Location: 8600-9301 bp Feature: domain Description: HAD_Neu5Ac-Pase_like Location: 8627-8729 bp Feature: domain Description: HAD_Neu5Ac-Pase_like Location: 8627-8729 bp Feature: domain Description: HAD_Neu5Ac-Pase_like Location: 8849-9164 bp Feature: domain Description: HAD_Neu5Ac-Pase_like Location: 8849-9164 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HAD_Neu5Ac-Pase_like (cd04305)