myRT

myRT report for GCA_002491305.1_ASM249130v1

Download annotations/find similar RTs

Seq: DKVR01000075.1 TPA_asm: Porphyromonadaceae bacterium UBA7173 UBA7173_contig_2079, whole genome shotgun sequence (29573 bp)
Overview 1 RT 1: 18-4261 bp Neighborhood of RT #1 [18, 4302] RVT-UG17 KefB TrkA_C TrkA_C surE Feature: gene Location: 18-1112 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 249-843 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 249-843 bp Feature: gene Location: 1244-3472 bp Feature: domain Description: KefB Location: 1265-2405 bp Feature: domain Description: KefB Location: 1 265-2405 bp Feature: domain Description: TrkA_C Location: 3017-3209 bp Feature: domain Description: TrkA_C Location: 301 7-3209 bp Feature: domain Description: TrkA_C Location: 3281-3470 bp Feature: domain Description: TrkA_C Location: 3281 -3470 bp Feature: gene Location: 3541-4302 bp Feature: domain Description: surE Location: 3562-4261 bp Feature: domain Description: surE Location: 3562-4261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, KefB (COG0475), TrkA_C (pfam02080), surE (TIGR00087)

Seq: DKVR01000063.1 TPA_asm: Porphyromonadaceae bacterium UBA7173 UBA7173_contig_5998, whole genome shotgun sequence (21227 bp)
Overview 1 RT 1: 407-4965 bp Neighborhood of RT #1 [407, 4991] WYL RVT-Retrons ycfP DUF4294 Feature: gene Location: 407-1321 bp Feature: domain Description: WYL Location: 773-1295 bp Feature: domain Description: WYL Location: 773-12 95 bp Feature: gene Location: 1646-2758 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1868-2441 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1868-2 441 bp Feature: gene Location: 2755-3687 bp Feature: domain Description: ycfP Location: 2764-3139 bp Feature: domain Description: ycfP Location: 2 764-3139 bp Feature: gene Location: 4314-4991 bp Feature: domain Description: DUF4294 Location: 4509-4965 bp Feature: domain Description: DUF42 94 Location: 4509-4965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WYL (pfam13280), RVT-Retrons, ycfP (COG3150), DUF4294 (pfam14127)