myRT

myRT report for GCA_002491735.1_ASM249173v1

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Seq: DKWL01000041.1 TPA_asm: Lachnoclostridium sp. UBA7153 UBA7153_contig_22464, whole genome shotgun sequence (19691 bp)
Overview 1 RT 1: 88-4689 bp Neighborhood of RT #1 [88, 4757] RVT-GII Phage_int_SAM_3 INT_ICEBs1_C_like Feature: gene Location: 88-282 bp Feature: gene Location: 831-1961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 996-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 996-1 61 4 bp Feature: gene Location: 3030-3356 bp Feature: gene Location: 3534-4757 bp Feature: domain Description: Phage_int_SAM_3 Location: 3735-3906 bp Feature: domain Description: Phage_int_SAM_3 Location: 3735-3906 bp Feature: domain Description: INT_ICEBs1_C_like Location: 4068-4689 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 4068-4689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-GII

Seq: DKWL01000104.1 TPA_asm: Lachnoclostridium sp. UBA7153 UBA7153_contig_3496, whole genome shotgun sequence (35902 bp)
Overview 1 RT 1: 27883-34983 bp Neighborhood of RT #1 [27883, 34983] SWIM RVT-Retrons Feature: gene Location: 27883-30669 bp Feature: gene Location: 30666-32423 bp Feature: domain Description: SWIM Location: 32247-32343 bp Feature: domain Description: SWIM Location: 32 2 47-32 343 bp Feature: gene Location: 32462-33892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33035-33659 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33035-33659 bp Feature: gene Location: 34093-34413 bp Feature: gene Location: 34573-34983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SWIM (pfam04434), RVT-Retrons

Seq: DKWL01000167.1 TPA_asm: Lachnoclostridium sp. UBA7153 UBA7153_contig_8090, whole genome shotgun sequence (5218 bp)
Overview 1 RT 1: 294-5215 bp Neighborhood of RT #1 [294, 5215] PIN_VapC-like RVT-GII GIIM Feature: gene Location: 294-725 bp Feature: domain Description: PIN_VapC-like Location: 318-648 bp Feature: domain Description: PIN_VapC-like Location: 3 18-648 bp Feature: gene Location: 727-903 bp Feature: gene Location: 1018-2259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1222-1879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1222-1879 bp Feature: domain Description: GIIM Note: maturase Location: 1960-2179 bp Feature: domain Description: GIIM Note: maturase Location: 1960-2179 bp Feature: gene Location: 2655-2798 bp Feature: gene Location: 3707-5215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PIN_VapC-like (cd18715)