myRT

myRT report for GCA_002493755.1_ASM249375v1

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Seq: DKZT01000070.1 TPA_asm: Ruminococcaceae bacterium UBA7067 UBA7067_contig_15251, whole genome shotgun sequence (21935 bp)
Overview 1 RT 1: 4262-9715 bp Neighborhood of RT #1 [4262, 9732] TnpV RVT-UNC PRK09736 Mrr_N COG4127 PRK11331 Feature: gene Location: 4262-4618 bp Feature: domain Description: TnpV Location: 4280-4610 bp Feature: domain Description: TnpV Location: 4280-461 0 bp Feature: gene Location: 4669-5190 bp Feature: gene Location: 5203-6186 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 5599-6049 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 5599-6049 bp Feature: gene Location: 6200-7219 bp Feature: domain Description: PRK09736 Location: 6203-7211 bp Feature: domain Description: PRK09736 Location: 6203-721 1 bp Feature: gene Location: 7216-9732 bp Feature: domain Description: Mrr_N Location: 8029-8275 bp Feature: domain Description: Mrr_N Location: 8029-8275 bp Feature: domain Description: COG4127 Location: 8389-8728 bp Feature: domain Description: COG41 27 Location: 8389-8728 bp Feature: domain Description: PRK11331 Location: 8878-9715 bp Feature: domain Description: PRK1 1 331 Location: 8878-971 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpV (pfam14198), RVT-AbiK/RVT-UG12/RVT-UG15/RVT-UG8(RVT-UNC), PRK09736 (5-methylcytosine-specific restriction enzyme subunit McrC; Provisional), Mrr_N (pfam14338), COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), PRK11331 (5-methylcytosine-specific restriction enzyme subunit McrB; Provisional)

Seq: DKZT01000059.1 TPA_asm: Ruminococcaceae bacterium UBA7067 UBA7067_contig_19770, whole genome shotgun sequence (9721 bp)
Overview 1 RT 1: 2-5054 bp Neighborhood of RT #1 [2, 5059] PRK11331 PRK11331 McrBC RVT-GII COG1373 Feature: gene Location: 2-1249 bp Feature: domain Description: PRK11331 Location: 71-455 bp Feature: domain Description: PRK11331 Location: 71-455 bp Feature: domain Description: PRK11331 Location: 599-1145 bp Feature: domain Description: PRK11331 Location: 599-1145 bp Feature: gene Location: 1242-2759 bp Feature: domain Description: McrBC Location: 1554-2445 bp Feature: domain Description: McrBC Location: 1554-2 445 bp Feature: gene Location: 3058-3993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3364-3958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3364-3958 bp Feature: gene Location: 4722-4880 bp Feature: gene Location: 4907-5059 bp Feature: domain Description: COG1373 Location: 4913-5054 bp Feature: domain Description: COG1373 Location: 4913-5054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11331 (5-methylcytosine-specific restriction enzyme subunit McrB; Provisional), McrBC (pfam10117), RVT-GII, COG1373 (Predicted ATPase, AAA+ superfamily )