myRT

myRT report for GCA_002501245.1_ASM250124v1

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Seq: DLRZ01000031.1 TPA_asm: Alteromonas australica isolate UBA7875 UBA7875_contig_1548, whole genome shotgun sequence (71580 bp)
Overview 1 RT 1: 21-5590 bp Neighborhood of RT #1 [21, 5694] YhhI YhhI YhhI RVT-UG8 RVT-UG3 M48C_Oma1_like SlyB Feature: gene Location: 21-1142 bp Feature: domain Description: YhhI Location: 63-312 bp Feature: domain Description: YhhI Location: 63-31 2 bp Feature: domain Description: YhhI Location: 444-648 bp Feature: domain Description: YhhI Location: 444-648 bp Feature: domain Description: YhhI Location: 834-1047 bp Feature: domain Description: YhhI Location: 834-1 047 bp Feature: gene Location: 1223-2710 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1727-2171 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 727-21 71 bp Feature: gene Location: 2700-3911 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2991-3456 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2991 -3456 bp Feature: gene Location: 4201-4998 bp Feature: domain Description: M48C_Oma1_like Location: 4408-4954 bp Feature: domain Description: M48C_Oma1 _like Location: 4408-4954 bp Feature: gene Location: 5206-5694 bp Feature: domain Description: SlyB Location: 5269-5590 bp Feature: domain Description: SlyB Location: 5269-5590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-UG8, RVT-UG3, M48C_Oma1_like (cd07342), SlyB (COG3133)

Seq: DLRZ01000061.1 TPA_asm: Alteromonas australica isolate UBA7875 UBA7875_contig_945, whole genome shotgun sequence (101100 bp)
Overview 1 RT 1: 79898-89960 bp Neighborhood of RT #1 [79898, 89986] SIR2_2 YjgR YjgR RVT-UG5 COG0610 DUF45 Feature: gene Location: 79898-80983 bp Feature: domain Description: SIR2_2 Location: 80312-80807 bp Feature: domain Description: SIR2 _2 Location: 80312 -80807 bp Feature: gene Location: 80985-82727 bp Feature: domain Description: YjgR Location: 81435-81630 bp Feature: domain Description: YjgR Location: 81435-81630 bp Feature: domain Description: YjgR Location: 82080-82659 bp Feature: domain Description: YjgR Location: 82 080-82 659 bp Feature: gene Location: 82955-85897 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 83444-83900 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 83444-83900 bp Feature: gene Location: 85941-89222 bp Feature: domain Description: COG0610 Location: 85968-89061 bp Feature: domain Description: COG0610 Location: 85968-89061 bp Feature: gene Location: 89237-89986 bp Feature: domain Description: DUF45 Location: 89345-89960 bp Feature: domain Description: DUF45 Location: 89345-89960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), YjgR (COG0433), RVT-UG5, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF45 (pfam01863)