myRT

myRT report for GCA_002504065.1_ASM250406v1

Download annotations/find similar RTs

Seq: NXLA01000373.1 Klebsiella pneumoniae strain K123 NODE_373_length_3885_cov_85.2068_ID_745, whole genome shotgun sequence (3885 bp)
Overview 1 RT 1: 174-3440 bp Neighborhood of RT #1 [174, 3440] INT_Cre_C RVT-GII Feature: gene Location: 174-491 bp Feature: gene Location: 557-1693 bp Feature: domain Description: INT_Cre_C Location: 980-1634 bp Feature: domain Description: INT_Cre_C Location: 980-1 634 bp Feature: gene Location: 1900-3267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2305-2836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2305-2836 bp Feature: gene Location: 3273-3440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII

Seq: NXLA01000008.1 Klebsiella pneumoniae strain K123 NODE_8_length_45122_cov_36.0058_ID_15, whole genome shotgun sequence (45122 bp)
Overview 1 RT 1: 2896-7899 bp Neighborhood of RT #1 [2896, 8057] FimD FimD RVT-UG4 Integrase_1 Feature: gene Location: 2896-4326 bp Feature: domain Description: FimD Location: 2953-4315 bp Feature: domain Description: FimD Location: 2 953-4315 bp Feature: gene Location: 4392-5504 bp Feature: domain Description: FimD Location: 4419-5493 bp Feature: domain Description: FimD Location: 4419-5493 bp Feature: gene Location: 5504-6955 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5912-6356 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5912 -6356 bp Feature: gene Location: 6952-7581 bp Feature: gene Location: 7638-8057 bp Feature: domain Description: Integrase_1 Location: 7644-7899 bp Feature: domain Description: Integrase_1 Location: 7644-7899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835)