myRT

myRT report for GCA_002504185.1_ASM250418v1

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Seq: CP023709.1 Vibrio parahaemolyticus strain HA2 chromosome 2 (1854765 bp)
Overview 1 RT 1: 115471-122028 bp 2 RT 2: 559627-566617 bp 3 RT 3: 570193-578744 bp Neighborhood of RT #1 [115471, 122036] YcxB SLATT_5 RVT-UG17 PRK05367 PRK01202 Neighborhood of RT #2 [559627, 566617] Relaxase RVT-Retrons AAA_15 Neighborhood of RT #3 [570193, 578749] RVT-UG3 RVT-UG8 RVT-AbiP2 PAS_3 Tar Feature: gene Location: 115471-115965 bp Feature: domain Description: YcxB Location: 115771-115918 bp Feature: domain Description: YcxB Location: 1 1 5771 -1 1 591 8 bp Feature: gene Location: 116531-117079 bp Feature: domain Description: SLATT_5 Location: 116540-117068 bp Feature: domain Description: SLATT_5 Location: 1 1 6540-1 1 7068 bp Feature: gene Location: 117091-118425 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 117313-117895 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 1 731 3-1 1 7895 bp Feature: gene Location: 118663-121527 bp Feature: domain Description: PRK05367 Location: 118684-121522 bp Feature: domain Description: PRK05367 Location: 1 1 8684-1 21 522 bp Feature: gene Location: 121656-122036 bp Feature: domain Description: PRK01202 Location: 121662-122028 bp Feature: domain Description: PRK01 202 Location: 1 21 662-1 22028 bp Feature: gene Location: 559627-561444 bp Feature: domain Description: Relaxase Location: 560065-560467 bp Feature: domain Description: Relaxase Location: 560065-560467 bp Feature: gene Location: 561906-562046 bp Feature: gene Location: 562097-563212 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 562268-562823 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 562268-562823 bp Feature: gene Location: 563351-565606 bp Feature: domain Description: AAA_15 Location: 563354-564350 bp Feature: domain Description: AAA_1 5 Location: 563354-564350 bp Feature: gene Location: 565844-566617 bp Feature: gene Location: 570193-570384 bp Feature: gene Location: 570998-571603 bp Feature: gene Location: 571604-572839 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 571892-572363 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 571 892-572363 bp Feature: gene Location: 572839-574824 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 573373-573820 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 573373-573820 bp Feature: gene Location: 575183-576718 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 575615-576071 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 57561 5-576071 bp Feature: gene Location: 576962-577135 bp Feature: gene Location: 577193-578749 bp Feature: domain Description: PAS_3 Location: 577277-577523 bp Feature: domain Description: PAS_3 Location: 577277-577523 bp Feature: domain Description: Tar Location: 577598-578744 bp Feature: domain Description: Tar Location: 577598-578744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YcxB (pfam14317), SLATT_5 (pfam18160), RVT-UG17, PRK05367 (aminomethyl-transferring glycine dehydrogenase), PRK01202 (glycine cleavage system protein GcvH), Relaxase (pfam03432), RVT-Retrons, AAA_15 (pfam13175), RVT-UG3, RVT-UG8
RVT-AbiP2, PAS_3 (pfam08447), Tar (COG0840)