myRT

myRT report for GCA_002507745.1_ASM250774v1

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Seq: NPLJ01000024.1 Salmonella enterica strain CFSAN060808 CFSAN060808_24, whole genome shotgun sequence (60923 bp)
Overview 1 RT 1: 1572-7487 bp Neighborhood of RT #1 [1572, 7487] DUF5375 Prim_Zn_Ribbon COG3378 RVT-Retrons TIR_2 HTH_Tnp_1 Feature: gene Location: 1572-1892 bp Feature: domain Description: DUF5375 Location: 1575-1890 bp Feature: domain Description: DUF5375 Location: 1 575-1 890 bp Feature: gene Location: 1907-4240 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1997-2105 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1 997-21 05 bp Feature: domain Description: COG3378 Location: 2714-4229 bp Feature: domain Description: COG3378 Location: 271 4-4229 bp Feature: gene Location: 4829-6460 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5144-5741 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51 44-5741 bp Feature: domain Description: TIR_2 Location: 6065-6425 bp Feature: domain Description: TIR_2 Location: 6065-6425 bp Feature: gene Location: 6538-6948 bp Feature: domain Description: HTH_Tnp_1 Location: 6553-6670 bp Feature: domain Description: HTH_Tnp_1 Location: 6553-6670 bp Feature: gene Location: 7329-7487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5375 (pfam17345), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), RVT-Retrons, TIR_2 (pfam13676), HTH_Tnp_1 (pfam01527)