myRT

myRT report for GCA_002508285.1_ASM250828v1

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Seq: PCGD01000061.1 Klebsiella pneumoniae strain Kp1210 Kp1210_S5_L001_R1_001__paired__contig_63, whole genome shotgun sequence (89782 bp)
Overview 1 RT 1: 50996-57864 bp Neighborhood of RT #1 [50996, 57866] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 50996-51724 bp Feature: domain Description: FimC Location: 51044-51707 bp Feature: domain Description: FimC Location: 51 044-51 707 bp Feature: gene Location: 51756-54365 bp Feature: domain Description: FimD Location: 51813-54354 bp Feature: domain Description: FimD Location: 51 81 3-54354 bp Feature: gene Location: 54365-56443 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 54773-55217 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 54773-5521 7 bp Feature: gene Location: 56500-56940 bp Feature: domain Description: Integrase_1 Location: 56506-56722 bp Feature: domain Description: Integrase_1 Location: 56506-56722 bp Feature: gene Location: 57201-57866 bp Feature: domain Description: INT_P4_C Location: 57306-57864 bp Feature: domain Description: INT_P4_C Location: 57306-57864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: PCGD01000097.1 Klebsiella pneumoniae strain Kp1210 Kp1210_S5_L001_R1_001__paired__contig_99, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 61-1745 bp Neighborhood of RT #1 [61, 1745] RVT-GII Feature: gene Location: 61-1545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: gene Location: 1599-1745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII