myRT

myRT report for GCA_002509325.1_ASM250932v1

Download annotations/find similar RTs

Seq: DADO01000084.1 TPA_asm: Methanosarcina sp. UBA402 UBA402_contig_1492, whole genome shotgun sequence (35176 bp)
Overview 1 RT 1: 401-7792 bp Neighborhood of RT #1 [401, 7824] RVT-GII GIIM CobN CobN COG4744 Feature: gene Location: 401-1225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 407-761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 407-761 bp Feature: domain Description: GIIM Note: maturase Location: 812-1046 bp Feature: domain Description: GIIM Note: maturase Location: 81 2-1 046 bp Feature: gene Location: 1927-7284 bp Feature: domain Description: CobN Location: 2005-2446 bp Feature: domain Description: CobN Location: 2005-2446 bp Feature: domain Description: CobN Location: 3022-7276 bp Feature: domain Description: CobN Location: 3022-7276 bp Feature: gene Location: 7432-7824 bp Feature: domain Description: COG4744 Location: 7435-7792 bp Feature: domain Description: COG4744 Location: 7435-7792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), CobN (COG1429), COG4744 (Uncharacterized protein )

Seq: DADO01000122.1 TPA_asm: Methanosarcina sp. UBA402 UBA402_contig_1814, whole genome shotgun sequence (26548 bp)
Overview 1 RT 1: 3207-5384 bp Neighborhood of RT #1 [3207, 5392] PRiA4_ORF3 RVT-CRISPR Cas6b_N Cas6b_C Feature: gene Location: 3207-3773 bp Feature: domain Description: PRiA4_ORF3 Location: 3228-3759 bp Feature: domain Description: PRiA4_ORF3 Location: 32 2 8-3759 bp Feature: gene Location: 3854-3997 bp Feature: gene Location: 4025-4222 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4034-4217 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4034-42 17 bp Feature: gene Location: 4346-4537 bp Feature: gene Location: 4718-5392 bp Feature: domain Description: Cas6b_N Location: 4739-5039 bp Feature: domain Description: Cas6b_N Location: 4739-5039 bp Feature: domain Description: Cas6b_C Location: 5051-5384 bp Feature: domain Description: Cas6b_C Location: 5051-5384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRiA4_ORF3 (pfam07929), RVT-CRISPR, Cas6b_N (pfam17955), Cas6b_C