myRT

myRT report for GCA_002510025.1_ASM251002v1

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Seq: NXKX01000148.1 Klebsiella pneumoniae strain ST-234:K062 NODE_148_length_10194_cov_18.1975_ID_295, whole genome shotgun sequence (10194 bp)
Overview 1 RT 1: 3231-9189 bp Neighborhood of RT #1 [3231, 9203] SbcB dacD RVT-GII PRK10016 YccC Feature: gene Location: 3231-4142 bp Feature: domain Description: SbcB Location: 3237-4032 bp Feature: domain Description: SbcB Location: 3237-4032 bp Feature: gene Location: 4317-5486 bp Feature: domain Description: dacD Location: 4326-5481 bp Feature: domain Description: dacD Location: 4326-5481 bp Feature: gene Location: 6004-7491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6409-7099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6409-7099 bp Feature: gene Location: 7573-8046 bp Feature: domain Description: PRK10016 Location: 7576-8035 bp Feature: domain Description: PRK1 001 6 Location: 7576-8035 bp Feature: gene Location: 8130-9203 bp Feature: domain Description: YccC Location: 8151-9189 bp Feature: domain Description: YccC Location: 81 51 -91 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)

Seq: NXKX01000006.1 Klebsiella pneumoniae strain ST-234:K062 NODE_6_length_73035_cov_27.5191_ID_11, whole genome shotgun sequence (73035 bp)
Overview 1 RT 1: 4645-11093 bp Neighborhood of RT #1 [4645, 11093] Nuc_deoxyrib_tr RVT-Retrons AAA_21 Feature: gene Location: 4645-4896 bp Feature: gene Location: 4926-5762 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 5415-5586 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 5415-5586 bp Feature: gene Location: 6418-7518 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6601-7129 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6601-712 9 bp Feature: gene Location: 8131-9390 bp Feature: domain Description: AAA_21 Location: 8437-8659 bp Feature: domain Description: AAA_2 1 Location: 8437-8659 bp Feature: gene Location: 10788-11093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_21 (pfam13304)