myRT

myRT report for GCA_002510095.1_ASM251009v1

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Seq: NXKP01000021.1 Klebsiella pneumoniae strain ST-14:K118 NODE_21_length_91491_cov_167.976, whole genome shotgun sequence (91491 bp)
Overview 1 RT 1: 689-7542 bp Neighborhood of RT #1 [689, 7559] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 689-1354 bp Feature: domain Description: INT_P4_C Location: 794-1352 bp Feature: domain Description: INT_P4_C Location: 794-1 352 bp Feature: gene Location: 1615-2055 bp Feature: domain Description: Integrase_1 Location: 1621-1837 bp Feature: domain Description: Integrase_1 Location: 1 621 -1 837 bp Feature: gene Location: 2112-4190 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2520-2964 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2520-2964 bp Feature: gene Location: 4190-6799 bp Feature: domain Description: FimD Location: 4247-6788 bp Feature: domain Description: FimD Location: 4247-6788 bp Feature: gene Location: 6831-7559 bp Feature: domain Description: FimC Location: 6879-7542 bp Feature: domain Description: FimC Location: 6879-7542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: NXKP01000098.1 Klebsiella pneumoniae strain ST-14:K118 NODE_98_length_1915_cov_631.009, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 3-1464 bp Neighborhood of RT #1 [3, 1856] RVT-GII Feature: gene Location: 3-215 bp Feature: gene Location: 369-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII