myRT

myRT report for GCA_002510675.1_ASM251067v1

Download annotations/find similar RTs

Seq: NLWR01000060.1 Escherichia coli strain MOD1-EC6496 MOD1-EC6496_60_length_35550_cov_85.5, whole genome shotgun sequence (35550 bp)
Overview 1 RT 1: 25461-32963 bp Neighborhood of RT #1 [25461, 32968] PAAR_2 RhsA RHS_repeat RhsA RhsA RVT-GII group_II_RT_mat YhhI YhhI Feature: gene Location: 25461-29666 bp Feature: domain Description: PAAR_2 Location: 25467-25548 bp Feature: domain Description: PAAR_2 Location: 25467-25548 bp Feature: domain Description: RhsA Location: 26046-26475 bp Feature: domain Description: RhsA Location: 26046-26475 bp Feature: domain Description: RHS_repeat Location: 26556-26646 bp Feature: domain Description: RHS_repeat Location: 26556-26646 bp Feature: domain Description: RhsA Location: 26715-27045 bp Feature: domain Description: RhsA Location: 2671 5-27045 bp Feature: domain Description: RhsA Location: 27078-29232 bp Feature: domain Description: RhsA Location: 27078-29232 bp Feature: gene Location: 30031-30258 bp Feature: gene Location: 30509-31588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30980-31571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30980-31 571 bp Feature: gene Location: 31610-31861 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 31616-31844 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 31 61 6-31 844 bp Feature: gene Location: 32225-32968 bp Feature: domain Description: YhhI Location: 32231-32576 bp Feature: domain Description: YhhI Location: 32231 -32576 bp Feature: domain Description: YhhI Location: 32633-32963 bp Feature: domain Description: YhhI Location: 32633-32963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAAR_2 (cd14738), RhsA (COG3209), RHS_repeat (pfam05593), RVT-GII, group_II_RT_mat (TIGR04416), YhhI (COG5433)