myRT

myRT report for GCA_002511525.1_ASM251152v1

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Seq: NLZY01000029.1 Escherichia coli strain MOD1-EC6315 MOD1-EC6315_29_length_51255_cov_27.804, whole genome shotgun sequence (51255 bp)
Overview 1 RT 1: 45196-49959 bp Neighborhood of RT #1 [45196, 50051] PRK09692 SLATT_5 RVT-UG17 Psu PRK09678 PRK09678 Feature: gene Location: 45196-46374 bp Feature: domain Description: PRK09692 Location: 45205-46357 bp Feature: domain Description: PRK09692 Location: 45205-46357 bp Feature: gene Location: 46391-47128 bp Feature: domain Description: SLATT_5 Location: 46490-47096 bp Feature: domain Description: SLATT_5 Location: 46490-47096 bp Feature: gene Location: 47227-48636 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 47464-48076 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 47464-48076 bp Feature: gene Location: 48959-49531 bp Feature: domain Description: Psu Location: 48977-49514 bp Feature: domain Description: Psu Location: 48977-4951 4 bp Feature: gene Location: 49605-50051 bp Feature: domain Description: PRK09678 Location: 49614-49686 bp Feature: domain Description: PRK09678 Location: 4961 4-49686 bp Feature: domain Description: PRK09678 Location: 49809-49959 bp Feature: domain Description: PRK09678 Location: 49809-49959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: NLZY01000034.1 Escherichia coli strain MOD1-EC6315 MOD1-EC6315_34_length_46251_cov_31.713, whole genome shotgun sequence (46251 bp)
Overview 1 RT 1: 17321-19745 bp Neighborhood of RT #1 [17321, 19819] PHA02517 InsE RVT-GII RVT-GII IS285 Feature: gene Location: 17321-18034 bp Feature: domain Description: PHA02517 Location: 17339-18023 bp Feature: domain Description: PHA02 517 Location: 17339-1802 3 bp Feature: gene Location: 18175-18477 bp Feature: domain Description: InsE Location: 18178-18463 bp Feature: domain Description: InsE Location: 18178-18463 bp Feature: gene Location: 18516-18719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18561-18717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18561-18717 bp Feature: gene Location: 18753-18989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18756-18939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18756-18939 bp Feature: gene Location: 19047-19184 bp Feature: gene Location: 19337-19819 bp Feature: domain Description: IS285 Location: 19367-19745 bp Feature: domain Description: IS2 85 Location: 19367-19745 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, IS285 (COG3328)