myRT

myRT report for GCA_002512005.1_ASM251200v1

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Seq: NMHU01000107.1 Escherichia coli strain MOD1-EC6499 MOD1-EC6499_108_length_6288_cov_46.7, whole genome shotgun sequence (6288 bp)
Overview 1 RT 1: 581-4407 bp Neighborhood of RT #1 [581, 4407] DDE_Tnp_IS66 DDE_Tnp_IS66_C PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 581-1099 bp Feature: domain Description: DDE_Tnp_IS66 Location: 599-944 bp Feature: domain Description: DDE_Tnp_IS66 Location: 599-944 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 965-1076 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 965-1 076 bp Feature: gene Location: 1234-1446 bp Feature: domain Description: PHA02517 Location: 1237-1381 bp Feature: domain Description: PHA0251 7 Location: 1 237-1 381 bp Feature: gene Location: 2038-3561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2311-3043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 1 -3043 bp Feature: domain Description: GIIM Note: maturase Location: 3118-3316 bp Feature: domain Description: GIIM Note: maturase Location: 31 1 8-331 6 bp Feature: gene Location: 3678-4124 bp Feature: domain Description: PHA02517 Location: 3681-4122 bp Feature: domain Description: PHA0251 7 Location: 3681 -41 22 bp Feature: gene Location: 4090-4407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)