myRT

myRT report for GCA_002512295.1_ASM251229v1

Download annotations/find similar RTs

Seq: NLYA01000048.1 Escherichia coli strain MOD1-EC6422 MOD1-EC6422_48_length_34634_cov_64, whole genome shotgun sequence (34634 bp)
Overview 1 RT 1: 25790-32047 bp Neighborhood of RT #1 [25790, 32052] PAAR_2 RhsA RHS_repeat RhsA RVT-GII group_II_RT_mat YhhI YhhI Feature: gene Location: 25790-28750 bp Feature: domain Description: PAAR_2 Location: 25796-25877 bp Feature: domain Description: PAAR_2 Location: 25796-25877 bp Feature: domain Description: RhsA Location: 26375-26804 bp Feature: domain Description: RhsA Location: 26375-26804 bp Feature: domain Description: RHS_repeat Location: 26885-26975 bp Feature: domain Description: RHS_repeat Location: 26885-26975 bp Feature: domain Description: RhsA Location: 27077-28316 bp Feature: domain Description: RhsA Location: 27077-2831 6 bp Feature: gene Location: 29115-29342 bp Feature: gene Location: 29593-30672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30064-30655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30064-30655 bp Feature: gene Location: 30694-30945 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 30700-30928 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 30700-30928 bp Feature: gene Location: 31309-32052 bp Feature: domain Description: YhhI Location: 31315-31660 bp Feature: domain Description: YhhI Location: 31 31 5-31 660 bp Feature: domain Description: YhhI Location: 31717-32047 bp Feature: domain Description: YhhI Location: 31 71 7-32047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAAR_2 (cd14738), RhsA (COG3209), RHS_repeat (pfam05593), RVT-GII, group_II_RT_mat (TIGR04416), YhhI (COG5433)

Seq: NLYA01000055.1 Escherichia coli strain MOD1-EC6422 MOD1-EC6422_55_length_50656_cov_58, whole genome shotgun sequence (50656 bp)
Overview 1 RT 1: 42768-47040 bp Neighborhood of RT #1 [42768, 47040] RVT-Retrons AAA_15 AAA_15 Feature: gene Location: 42768-42932 bp Feature: gene Location: 43275-43553 bp Feature: gene Location: 43550-44371 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43694-44255 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43694-442 55 bp Feature: gene Location: 44544-46661 bp Feature: domain Description: AAA_15 Location: 44547-44964 bp Feature: domain Description: AAA_15 Location: 44547-44964 bp Feature: domain Description: AAA_15 Location: 45102-45528 bp Feature: domain Description: AAA_15 Location: 45102 -4552 8 bp Feature: gene Location: 46807-47040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_15 (pfam13175)