myRT

myRT report for GCA_002513275.1_ASM251327v1

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Seq: NLWN01000019.1 Escherichia coli strain MOD1-EC6502 MOD1-EC6502_19_length_23172_cov_86.4, whole genome shotgun sequence (23172 bp)
Overview 1 RT 1: 7551-13559 bp Neighborhood of RT #1 [7551, 13576] proA PRK09692 RVT-UG7 Psu Feature: gene Location: 7551-8804 bp Feature: domain Description: proA Location: 7578-8769 bp Feature: domain Description: proA Location: 7578-8769 bp Feature: gene Location: 9159-10343 bp Feature: domain Description: PRK09692 Location: 9165-10320 bp Feature: domain Description: PRK09692 Location: 91 65-1 0320 bp Feature: gene Location: 10336-11964 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 10744-11173 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 0744-1 1 1 73 bp Feature: gene Location: 11961-12701 bp Feature: gene Location: 13004-13576 bp Feature: domain Description: Psu Location: 13022-13559 bp Feature: domain Description: Psu Location: 1 3022-1 3559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: NLWN01000031.1 Escherichia coli strain MOD1-EC6502 MOD1-EC6502_31_length_16628_cov_91.0, whole genome shotgun sequence (16628 bp)
Overview 1 RT 1: 3882-7593 bp Neighborhood of RT #1 [3882, 7593] LacI PBP1_GntR RVT-GII GIIM RVT-GII Feature: gene Location: 3882-4913 bp Feature: domain Description: LacI Location: 3924-4059 bp Feature: domain Description: LacI Location: 392 4-4059 bp Feature: domain Description: PBP1_GntR Location: 4098-4908 bp Feature: domain Description: PBP1_GntR Location: 4098-4908 bp Feature: gene Location: 5044-5262 bp Feature: gene Location: 5440-6291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5443-5851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5443-5851 bp Feature: domain Description: GIIM Note: maturase Location: 5899-6121 bp Feature: domain Description: GIIM Note: maturase Location: 5899-612 1 bp Feature: gene Location: 6264-6698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6456-6672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6456-6672 bp Feature: gene Location: 6867-7064 bp Feature: gene Location: 7423-7593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388)