myRT

myRT report for GCA_002513385.1_ASM251338v1

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Seq: NLWX01000023.1 Escherichia coli strain MOD1-EC6490 MOD1-EC6490_23_length_92251_cov_82.1, whole genome shotgun sequence (92251 bp)
Overview 1 RT 1: 86232-89135 bp Neighborhood of RT #1 [86232, 89152] DDE_Tnp_1_assoc group_II_RT_mat RVT-GII RVT-GII YhhI YhhI YhhI Feature: gene Location: 86232-86459 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 86247-86412 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 86247-8641 2 bp Feature: gene Location: 87190-87411 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 87196-87400 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 871 96-87400 bp Feature: gene Location: 87417-87557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87420-87555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87420-87555 bp Feature: gene Location: 87812-87997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87818-87980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8781 8-87980 bp Feature: gene Location: 88683-88961 bp Feature: domain Description: YhhI Location: 88695-88818 bp Feature: domain Description: YhhI Location: 88695-8881 8 bp Feature: domain Description: YhhI Location: 88818-88902 bp Feature: domain Description: YhhI Location: 8881 8-88902 bp Feature: gene Location: 88964-89152 bp Feature: domain Description: YhhI Location: 88973-89135 bp Feature: domain Description: YhhI Location: 88973-891 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), group_II_RT_mat (TIGR04416), RVT-GII, YhhI (COG5433)

Seq: NLWX01000006.1 Escherichia coli strain MOD1-EC6490 MOD1-EC6490_6_length_269409_cov_86.7, whole genome shotgun sequence (269409 bp)
Overview 1 RT 1: 151183-156143 bp Neighborhood of RT #1 [151183, 156160] Q RVT-AbiP2 Phage_GPA DUF5405 Feature: gene Location: 151183-152217 bp Feature: domain Description: Q Location: 151186-152209 bp Feature: domain Description: Q Location: 151186-152 2 09 bp Feature: gene Location: 152256-152417 bp Feature: gene Location: 152430-154142 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 153012-153465 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 153012 -153465 bp Feature: gene Location: 154246-155847 bp Feature: domain Description: Phage_GPA Location: 154249-154948 bp Feature: domain Description: Phage_GPA Location: 1542 49-154948 bp Feature: gene Location: 155912-156160 bp Feature: domain Description: DUF5405 Location: 155921-156143 bp Feature: domain Description: DUF5405 Location: 15592 1-156143 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840), DUF5405 (pfam17399)