myRT

myRT report for GCA_002514015.1_ASM251401v1

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Seq: NMIT01000300.1 Escherichia coli strain MOD1-EC6355 MOD1-EC6355_315_length_248_cov_4.11696, whole genome shotgun sequence (248 bp)
Overview 1 RT 1: 1-247 bp Neighborhood of RT #1 [1, 246] RVT-UG5 Feature: gene Location: 1-246 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4-247 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4-247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5

Seq: NMIT01000073.1 Escherichia coli strain MOD1-EC6355 MOD1-EC6355_73_length_24588_cov_28.7868, whole genome shotgun sequence (24588 bp)
Overview 1 RT 1: 18704-23433 bp Neighborhood of RT #1 [18704, 23453] TerD RVT-GII GIIM TerD vWA-TerF-like InsE Feature: gene Location: 18704-19279 bp Feature: domain Description: TerD Location: 18707-19265 bp Feature: domain Description: TerD Location: 18707-192 65 bp Feature: gene Location: 19433-19738 bp Feature: gene Location: 19781-21169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20111-20729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0111-2 072 9 bp Feature: domain Description: GIIM Note: maturase Location: 20777-21008 bp Feature: domain Description: GIIM Note: maturase Location: 2 0777-2 1008 bp Feature: gene Location: 21629-22870 bp Feature: domain Description: TerD Location: 21632-22112 bp Feature: domain Description: TerD Location: 2 1632 -2 2 112 bp Feature: domain Description: vWA-TerF-like Location: 22265-22865 bp Feature: domain Description: vWA-TerF-like Location: 2 2 2 65-2 2 865 bp Feature: gene Location: 23028-23453 bp Feature: domain Description: InsE Location: 23043-23433 bp Feature: domain Description: InsE Location: 2 3043-2 3433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TerD (pfam02342), RVT-GII, GIIM (pfam08388), vWA-TerF-like (pfam10138), InsE (COG2963)