myRT

myRT report for GCA_002514025.1_ASM251402v1

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Seq: NMIQ01000122.1 Escherichia coli strain MOD1-EC6358 MOD1-EC6358_122_length_3769_cov_29.873, whole genome shotgun sequence (3769 bp)
Overview 1 RT 1: 451-3692 bp Neighborhood of RT #1 [451, 3700] DUF1778 Acetyltransf_10 RVT-AbiP2 Tra5 Feature: gene Location: 451-744 bp Feature: domain Description: DUF1778 Location: 484-718 bp Feature: domain Description: DUF1 778 Location: 484-71 8 bp Feature: gene Location: 728-1243 bp Feature: domain Description: Acetyltransf_10 Location: 986-1166 bp Feature: domain Description: Acetyltransf_1 0 Location: 986-1 1 66 bp Feature: gene Location: 1617-3155 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2046-2502 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2046-2502 bp Feature: gene Location: 3212-3343 bp Feature: gene Location: 3401-3700 bp Feature: domain Description: Tra5 Location: 3416-3692 bp Feature: domain Description: Tra5 Location: 341 6-3692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1778 (pfam08681), Acetyltransf_10 (pfam13673), RVT-AbiP2, Tra5 (COG2801)

Seq: NMIQ01000133.1 Escherichia coli strain MOD1-EC6358 MOD1-EC6358_133_length_2509_cov_28.7113, whole genome shotgun sequence (2509 bp)
Overview 1 RT 1: 159-2263 bp Neighborhood of RT #1 [159, 2263] RVT_N RVT-GII YkfC HNHc Feature: gene Location: 159-1829 bp Feature: domain Description: RVT_N Location: 207-450 bp Feature: domain Description: RVT_N Location: 2 07-450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 495-1137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 495-1137 bp Feature: domain Description: YkfC Location: 1269-1509 bp Feature: domain Description: YkfC Location: 12 69-1509 bp Feature: domain Description: HNHc Note: nucleases Location: 1635-1794 bp Feature: domain Description: HNHc Note: nucleases Location: 1635-1794 bp Feature: gene Location: 1856-2263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)