myRT

myRT report for GCA_002514445.1_ASM251444v1

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Seq: NMHB01000010.1 Escherichia coli strain MOD1-EC5946 MOD1-EC5946_10_length_169812_cov_25.6412, whole genome shotgun sequence (169812 bp)
Overview 1 RT 1: 1-2507 bp Neighborhood of RT #1 [1, 2524] DUF987 CbeA_antitoxin RVT-GII GIIM CbeA_antitoxin Feature: gene Location: 1-216 bp Feature: domain Description: DUF987 Location: 4-190 bp Feature: domain Description: DUF987 Location: 4-1 90 bp Feature: gene Location: 227-634 bp Feature: domain Description: CbeA_antitoxin Location: 341-587 bp Feature: domain Description: CbeA_antitoxin Location: 341 -587 bp Feature: gene Location: 671-1912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 878-1535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 878-1 535 bp Feature: domain Description: GIIM Note: maturase Location: 1616-1838 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 6-1 838 bp Feature: gene Location: 1939-2289 bp Feature: gene Location: 2330-2524 bp Feature: domain Description: CbeA_antitoxin Location: 2450-2507 bp Feature: domain Description: CbeA_antitoxin Location: 2450-2507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF987 (pfam06174), CbeA_antitoxin (pfam06154), RVT-GII, GIIM (pfam08388)