myRT

myRT report for GCA_002515585.1_ASM251558v1

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Seq: NJWP01000115.1 Escherichia coli strain MOD1-EC3861 MOD1-EC3861_115_length_3037_cov_775.511, whole genome shotgun sequence (2832 bp)
Overview 1 RT 1: 3-1090 bp Neighborhood of RT #1 [3, 1090] RVT-Retrons Feature: gene Location: 3-641 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 147-636 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 47-636 bp Feature: gene Location: 663-845 bp Feature: gene Location: 935-1090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: NJWP01000152.1 Escherichia coli strain MOD1-EC3861 MOD1-EC3861_152_length_1264_cov_868.677, whole genome shotgun sequence (1264 bp)
Overview 1 RT 1: 1-821 bp Neighborhood of RT #1 [1, 1261] CspC RVT-Retrons Feature: gene Location: 1-282 bp Feature: gene Location: 481-684 bp Feature: domain Description: CspC Location: 484-679 bp Feature: domain Description: CspC Location: 484-679 bp Feature: gene Location: 689-1261 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 692-821 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 692 -82 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CspC (COG1278), RVT-Retrons

Seq: NJWP01000068.1 Escherichia coli strain MOD1-EC3861 MOD1-EC3861_68_length_12447_cov_62.4416, whole genome shotgun sequence (12447 bp)
Overview 1 RT 1: 37-5402 bp Neighborhood of RT #1 [37, 5437] RVT-UG7 PRK09692 proA Feature: gene Location: 37-177 bp Feature: gene Location: 287-1027 bp Feature: gene Location: 1024-2652 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1432-1861 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 143 2-1861 bp Feature: gene Location: 2645-3829 bp Feature: domain Description: PRK09692 Location: 2651-3806 bp Feature: domain Description: PRK09692 Location: 2651-3 806 bp Feature: gene Location: 4184-5437 bp Feature: domain Description: proA Location: 4211-5402 bp Feature: domain Description: proA Location: 4211-5402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), proA (TIGR00407)