myRT

myRT report for GCA_002516105.1_ASM251610v1

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Seq: NJSC01000016.1 Escherichia coli strain MOD1-EC3801 MOD1-EC3801_16_length_107862_cov_35.4104, whole genome shotgun sequence (107862 bp)
Overview 1 RT 1: 105533-107848 bp Neighborhood of RT #1 [105533, 107859] SLATT_5 RVT-UG17 Caudo_TAP Feature: gene Location: 105533-105673 bp Feature: gene Location: 105686-106237 bp Feature: domain Description: SLATT_5 Location: 105692-106208 bp Feature: domain Description: SLATT_5 Location: 1 05692-1 06208 bp Feature: gene Location: 106215-107585 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 106443-107049 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 06443-1 07049 bp Feature: gene Location: 107698-107859 bp Feature: domain Description: Caudo_TAP Location: 107701-107848 bp Feature: domain Description: Caudo_TAP Location: 1 07701 -1 07848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413)

Seq: NJSC01000019.1 Escherichia coli strain MOD1-EC3801 MOD1-EC3801_19_length_87158_cov_36.9009, whole genome shotgun sequence (87158 bp)
Overview 1 RT 1: 1140-5927 bp Neighborhood of RT #1 [1140, 5944] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-UG28 CbtA_toxin CbeA_antitoxin Feature: gene Location: 1140-2678 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1257-1470 bp Feature: domain Description: LZ_Tnp_IS66 Location: 12 57-1470 bp Feature: domain Description: zf-IS66 Location: 1497-1623 bp Feature: domain Description: zf-IS66 Location: 1497-162 3 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1668-2523 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1668-2 52 3 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2544-2655 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 544-2 655 bp Feature: gene Location: 3081-3326 bp Feature: gene Location: 3417-4919 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 3705-4344 bp Feature: RT Description: RVT-UG2 8 Note: UG2 8 RT Location: 3705-4344 bp Feature: gene Location: 5223-5540 bp Feature: domain Description: CbtA_toxin Location: 5226-5532 bp Feature: domain Description: CbtA_toxin Location: 52 2 6-5532 bp Feature: gene Location: 5579-5944 bp Feature: domain Description: CbeA_antitoxin Location: 5630-5927 bp Feature: domain Description: CbeA_antitoxin Location: 5630-592 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-UG28, CbtA_toxin (pfam06755), CbeA_antitoxin (pfam06154)