myRT

myRT report for GCA_002516505.1_ASM251650v1

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Seq: NOGU01000018.1 Escherichia coli strain MOD1-EC5134 MOD1-EC5134_18_length_100625_cov_39.3699, whole genome shotgun sequence (100625 bp)
Overview 1 RT 1: 48525-52407 bp Neighborhood of RT #1 [48525, 52412] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 48525-48983 bp Feature: domain Description: dut Location: 48531-48978 bp Feature: domain Description: dut Location: 48531 -48978 bp Feature: gene Location: 49090-49686 bp Feature: domain Description: slmA Location: 49096-49672 bp Feature: domain Description: slmA Location: 49096-49672 bp Feature: gene Location: 49732-50691 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49867-50416 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49867-5041 6 bp Feature: gene Location: 50989-51645 bp Feature: domain Description: pyrE Location: 51007-51640 bp Feature: domain Description: pyrE Location: 51 007-51 640 bp Feature: gene Location: 51696-52412 bp Feature: domain Description: rph Location: 51699-52407 bp Feature: domain Description: rph Location: 51 699-52407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: NOGU01000051.1 Escherichia coli strain MOD1-EC5134 MOD1-EC5134_51_length_23045_cov_47.6303, whole genome shotgun sequence (23045 bp)
Overview 1 RT 1: 171-4774 bp Neighborhood of RT #1 [171, 4774] DUF3987 Inovirus_Gp2 RVT-GII Feature: gene Location: 171-1361 bp Feature: domain Description: DUF3987 Location: 177-1098 bp Feature: domain Description: DUF3987 Location: 177-1098 bp Feature: gene Location: 2220-2783 bp Feature: domain Description: Inovirus_Gp2 Location: 2277-2718 bp Feature: domain Description: Inovirus_Gp2 Location: 2 2 77-2 718 bp Feature: gene Location: 3109-4272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3223-3910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 2 3-3910 bp Feature: gene Location: 4259-4567 bp Feature: gene Location: 4601-4774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), Inovirus_Gp2 (pfam11726), RVT-GII