myRT

myRT report for GCA_002516925.1_ASM251692v1

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Seq: NOGF01000063.1 Escherichia coli strain MOD1-EC5149 MOD1-EC5149_63_length_9328_cov_45.9611, whole genome shotgun sequence (9328 bp)
Overview 1 RT 1: 1458-9328 bp Neighborhood of RT #1 [1458, 9327] PAAR_2 RhsA RHS_repeat RhsA RhsA RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 1458-5678 bp Feature: domain Description: PAAR_2 Location: 1464-1545 bp Feature: domain Description: PAAR_2 Location: 1 464-1 545 bp Feature: domain Description: RhsA Location: 2043-2490 bp Feature: domain Description: RhsA Location: 2043-2490 bp Feature: domain Description: RHS_repeat Location: 2553-2643 bp Feature: domain Description: RHS_repeat Location: 2553-2643 bp Feature: domain Description: RhsA Location: 2712-3048 bp Feature: domain Description: RhsA Location: 271 2-3048 bp Feature: domain Description: RhsA Location: 3075-5244 bp Feature: domain Description: RhsA Location: 3075-5244 bp Feature: gene Location: 6692-7066 bp Feature: gene Location: 7415-8914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7868-8525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7868-8525 bp Feature: domain Description: GIIM Note: maturase Location: 8609-8819 bp Feature: domain Description: GIIM Note: maturase Location: 8609-881 9 bp Feature: gene Location: 9121-9327 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 9142-9328 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 91 42-9328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAAR_2 (cd14738), RhsA (COG3209), RHS_repeat (pfam05593), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808)