myRT

myRT report for GCA_002517465.1_ASM251746v1

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Seq: NODU01000132.1 Escherichia coli strain MOD1-EC5606 MOD1-EC5606_132_length_3328_cov_51.5595, whole genome shotgun sequence (3328 bp)
Overview 1 RT 1: 226-2850 bp Neighborhood of RT #1 [226, 2876] RVT-GII DcuC Feature: gene Location: 226-375 bp Feature: gene Location: 423-869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 729-831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 729-831 bp Feature: gene Location: 1091-1462 bp Feature: gene Location: 1515-2876 bp Feature: domain Description: DcuC Location: 1518-2850 bp Feature: domain Description: DcuC Location: 1 51 8-2850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII

Seq: NODU01000083.1 Escherichia coli strain MOD1-EC5606 MOD1-EC5606_83_length_14059_cov_20.7462, whole genome shotgun sequence (14059 bp)
Overview 1 RT 1: 8268-13991 bp Neighborhood of RT #1 [8268, 14056] HsdM PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 8268-10691 bp Feature: domain Description: HsdM Location: 8289-10233 bp Feature: domain Description: HsdM Location: 82 89-102 33 bp Feature: gene Location: 10950-11303 bp Feature: domain Description: PHA02517 Location: 10953-11298 bp Feature: domain Description: PHA02 517 Location: 10953-112 98 bp Feature: gene Location: 11498-13021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11771-12503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11771-12 503 bp Feature: domain Description: GIIM Note: maturase Location: 12578-12776 bp Feature: domain Description: GIIM Note: maturase Location: 12 578-12 776 bp Feature: gene Location: 12975-13400 bp Feature: gene Location: 13613-14056 bp Feature: domain Description: PHA02517 Location: 13637-13991 bp Feature: domain Description: PHA02 517 Location: 13637-13991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HsdM (COG0286)