myRT

myRT report for GCA_002517625.1_ASM251762v1

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Seq: NNWJ01000012.1 Escherichia coli strain MOD1-EC6415 MOD1-EC6415_12_length_148223_cov_35.7226, whole genome shotgun sequence (148223 bp)
Overview 1 RT 1: 127494-135226 bp Neighborhood of RT #1 [127494, 135246] Peptidase_M78 IncA RVT-UG5 PRK04247 RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like Feature: gene Location: 127494-128042 bp Feature: domain Description: Peptidase_M78 Location: 127647-128010 bp Feature: domain Description: Peptidase_M78 Location: 1 27647-1 2801 0 bp Feature: gene Location: 128042-128716 bp Feature: domain Description: IncA Location: 128333-128675 bp Feature: domain Description: IncA Location: 1 28333-1 28675 bp Feature: gene Location: 129165-132182 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 129663-130152 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 29663-1 301 52 bp Feature: gene Location: 132360-133460 bp Feature: domain Description: PRK04247 Location: 132423-132654 bp Feature: domain Description: PRK04247 Location: 1 32423-1 32654 bp Feature: gene Location: 133471-135246 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 134062-134350 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 1 34062-1 34350 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 134653-135226 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 1 34653-1 35226 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: NNWJ01000016.1 Escherichia coli strain MOD1-EC6415 MOD1-EC6415_16_length_100568_cov_54.6854, whole genome shotgun sequence (100568 bp)
Overview 1 RT 1: 47039-50092 bp Neighborhood of RT #1 [47039, 50092] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 47039-47461 bp Feature: domain Description: DUF1380 Location: 47042-47339 bp Feature: domain Description: DUF1380 Location: 47042 -47339 bp Feature: gene Location: 47513-47848 bp Feature: gene Location: 47963-49630 bp Feature: domain Description: RVT_N Location: 48011-48248 bp Feature: domain Description: RVT_N Location: 48011-482 48 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48299-48941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 482 99-48941 bp Feature: domain Description: GIIM Note: maturase Location: 48992-49226 bp Feature: domain Description: GIIM Note: maturase Location: 48992 -492 2 6 bp Feature: domain Description: HNHc Note: nucleases Location: 49436-49595 bp Feature: domain Description: HNHc Note: nucleases Location: 49436-49595 bp Feature: gene Location: 49646-49783 bp Feature: gene Location: 49910-50092 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: NNWJ01000045.1 Escherichia coli strain MOD1-EC6415 MOD1-EC6415_45_length_24076_cov_60.7997, whole genome shotgun sequence (24076 bp)
Overview 1 RT 1: 9023-12786 bp Neighborhood of RT #1 [9023, 12786] PRK15211 RVT-UG4 Feature: gene Location: 9023-9718 bp Feature: domain Description: PRK15211 Location: 9029-9710 bp Feature: domain Description: PRK15211 Location: 9029-9710 bp Feature: gene Location: 9725-10306 bp Feature: gene Location: 10306-11280 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 10645-11086 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 10645-11086 bp Feature: gene Location: 11309-12151 bp Feature: gene Location: 12427-12786 bp Sorry, your browser does not support inline SVG.
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