myRT

myRT report for GCA_002517765.1_ASM251776v1

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Seq: NNWV01000029.1 Escherichia coli strain MOD1-EC6372 MOD1-EC6372_29_length_43677_cov_68.072, whole genome shotgun sequence (43677 bp)
Overview 1 RT 1: 34558-43672 bp Neighborhood of RT #1 [34558, 43674] AIDA AIDA AIDA AIDA AIDA AIDA AIDA AIDA AIDA AIDA AIDA AIDA AidA RVT-Retrons DUF932 PHA02517 Feature: gene Location: 34558-34926 bp Feature: gene Location: 35239-39795 bp Feature: domain Description: AIDA Location: 35431-35611 bp Feature: domain Description: AIDA Location: 35431 -3561 1 bp Feature: domain Description: AIDA Location: 35632-35770 bp Feature: domain Description: AIDA Location: 35632-35770 bp Feature: domain Description: AIDA Location: 35923-36043 bp Feature: domain Description: AIDA Location: 35923-36043 bp Feature: domain Description: AIDA Location: 36133-36319 bp Feature: domain Description: AIDA Location: 361 33-3631 9 bp Feature: domain Description: AIDA Location: 36430-36583 bp Feature: domain Description: AIDA Location: 36430-36583 bp Feature: domain Description: AIDA Location: 36631-36817 bp Feature: domain Description: AIDA Location: 36631 -3681 7 bp Feature: domain Description: AIDA Location: 36913-37096 bp Feature: domain Description: AIDA Location: 3691 3-37096 bp Feature: domain Description: AIDA Location: 37204-37300 bp Feature: domain Description: AIDA Location: 37204-37300 bp Feature: domain Description: AIDA Location: 37348-37471 bp Feature: domain Description: AIDA Location: 37348-37471 bp Feature: domain Description: AIDA Location: 37507-37693 bp Feature: domain Description: AIDA Location: 37507-37693 bp Feature: domain Description: AIDA Location: 37702-37855 bp Feature: domain Description: AIDA Location: 37702-37855 bp Feature: domain Description: AIDA Location: 37897-38077 bp Feature: domain Description: AIDA Location: 37897-38077 bp Feature: domain Description: AidA Location: 38725-39652 bp Feature: domain Description: AidA Location: 38725-39652 bp Feature: gene Location: 40440-42164 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40578-41202 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40578-41 202 bp Feature: gene Location: 42415-43236 bp Feature: domain Description: DUF932 Location: 42526-43201 bp Feature: domain Description: DUF932 Location: 42526-43201 bp Feature: gene Location: 43447-43674 bp Feature: domain Description: PHA02517 Location: 43450-43672 bp Feature: domain Description: PHA0251 7 Location: 43450-43672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AIDA (pfam16168), AidA (COG3468), RVT-Retrons, DUF932 (pfam06067), PHA02517 (putative transposase OrfB; Reviewed)

Seq: NNWV01000047.1 Escherichia coli strain MOD1-EC6372 MOD1-EC6372_47_length_7523_cov_67.1629, whole genome shotgun sequence (7523 bp)
Overview 1 RT 1: 261-2904 bp Neighborhood of RT #1 [261, 2904] RVT-GII GIIM Feature: gene Location: 261-1760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714-1371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1455-1665 bp Feature: domain Description: GIIM Note: maturase Location: 1455-1665 bp Feature: gene Location: 2109-2483 bp Feature: gene Location: 2704-2904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)